|
Name : EcolC_2938 (EcolC_2938) Accession : YP_001725892.1 Strain : Escherichia coli ATCC 8739 Genome accession: NC_010468 Putative virulence/resistance : Virulence Product : pili assembly chaperone Function : - COG functional category : N : Cell motility COG ID : COG3121 EC number : - Position : 3205515 - 3206246 bp Length : 732 bp Strand : + Note : PFAM: pili assembly chaperone; KEGG: ssn:SSON_0668 putative chaperone DNA sequence : ATGACATTTATGAAAGGACTACCCCTTTTGTTGTTGGTTGCCAGTCTGTGCAGCCACGCTGCACTACAACCCGATCGCAC TCGTATTGTGTTTAACGCTAATGATAAAGCTACCAGTCTGCGGGTGGATAATCGTAGCGATAAACTCCCCTACCTCGCTT ATTCCTGGCTCGAAAATGAAAAAGGGGAGAAAAGCGATGATCTTCTGGTCGCCCTGCCGCCGATACAACGTCTGGAACCG AAAGCAACAACGCAGGTACGGATAGTAAAGCAAGCCTCGACCACAAAATTACCGGGCGATCGCGAAACGCTATTTTTCTA CAATATGCGTGAAATTCCTCCCGCCCCGGAAAAAAACAGCGACCATGCCGTTCTGCAAGTCGCCATTCAGAGTCGTATCA AGGTGTTCTGGCGACCGGCTGCATTACGCAAGAAAGCAGGAGAAAAGGTCGAACTGCAGTTACAGGTCAGCCAGCAGGGC AACCAACTGACACTGAAAAATCCTACCGCGTATTATCTGACCATTGCCTACCTGGGACGAAATGAAAAAGGCGTTCTCCC CGGCTTCAAAACCGTGATGGTTGCGCCTTTTAGTACGGTCAACACAAACACCGGAAGCTATAGCGGCAGCCAGTTCTATC TCGGTTATATGGATGATTACGGCGCGTTACGCATGACGATGCTCAACTGCAGCGGACAATGCCATTTACAAGCCGTGGAG GCGAAGAAATGA Protein sequence : MTFMKGLPLLLLVASLCSHAALQPDRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKSDDLLVALPPIQRLEP KATTQVRIVKQASTTKLPGDRETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALRKKAGEKVELQLQVSQQG NQLTLKNPTAYYLTIAYLGRNEKGVLPGFKTVMVAPFSTVNTNTGSYSGSQFYLGYMDDYGALRMTMLNCSGQCHLQAVE AKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| prfD | CAD42028.1 | PrfD protein | Virulence | PAI II 536 | Protein | 2e-37 | 42 |
| papD | YP_002414014.1 | Chaperone protein PapD | Not tested | Not named | Protein | 2e-37 | 42 |
| papD | AAZ04423.1 | P pilus chaperone | Virulence | PAI I APEC-O1 | Protein | 2e-37 | 42 |
| papD | AAL67413.1 | PapD | Virulence | PAI II CFT073 | Protein | 2e-37 | 42 |
| papD | YP_854253.1 | pilus assembly protein chaperone PapD | Virulence | PAI I APEC-O1 | Protein | 3e-37 | 42 |
| papD_2 | NP_757033.1 | PapD protein | Virulence | PAI II CFT073 | Protein | 2e-37 | 42 |
| papD | NP_755464.1 | PapD protein | Virulence | PAI I CFT073 | Protein | 8e-33 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EcolC_2938 | YP_001725892.1 | pili assembly chaperone | VFG1547 | Protein | 9e-38 | 42 |
| EcolC_2938 | YP_001725892.1 | pili assembly chaperone | VFG0896 | Protein | 1e-37 | 42 |
| EcolC_2938 | YP_001725892.1 | pili assembly chaperone | VFG0885 | Protein | 3e-33 | 41 |
