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Name : EcolC_2197 (EcolC_2197) Accession : YP_001725163.1 Strain : Escherichia coli ATCC 8739 Genome accession: NC_010468 Putative virulence/resistance : Virulence Product : RNA-directed DNA polymerase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3344 EC number : - Position : 2411676 - 2412998 bp Length : 1323 bp Strand : - Note : PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: lpc:LPC_1850 reverse transcriptase DNA sequence : ATGAACGTGGAGCGAAGGGGCAGCGTCGGGCAGTCTGCATCACAGCCCAACTGTAAACAGGAGGAGGCTGCGGGTGAACA GACAAAACCGTTTCAGGTCAGTAAATTGCATGTGGTGGAAGCGTACCGGCGGGTAAAGGCGAATGCCGGAGCTGCCGGAG TGGATAACCAGACGCTGAAAGATTTTGAGCGGGATCTGAAAGGAAATCTGTACAAAATCTGGAACCGGTTATCGTCGGGA AGCTGGATGCCGCCGCCAGTGCGTGCGGTGGAAATTCCGAAGAAGGATGGCAGTAAAAGACTTTTAGGAATACCGACAGT AAGCGATCGAATAGCGCAGATGACGGTGCTGGTAACGTTTGAACCATTAGTGGAGCGTTATTTCCTGAATGATTCATACG GATACCGGCATGGAAAATCAGCGCTGGATGCAATAGCAGTCACCAGAAAACGTTGCTGGCAATACGACTGGTATCTTGAG TTTGATATTAAAGGTTTATTCGATAATATCCCCCACGATTTATTACTCAGGGCAGTGGATAAACATTGTGCGGATAAATG GGTAAGACTGTCTATTCGCAGGTGGCTGACAGCGCCGGTGCAGATGCCGGATGGAACACTAAAGGAAAGAAATAAAGGTA CGCCACAGGGTGGAGTCATCAGTCCGGTACTGGCGAATTTATTTCTGCACTATGTGTTTGATAAATGGCTGTCGTTACTT TATCCGGAAATTCCCTGGTGTCGTTATGCAGATGATGGATTAATTCATTGTGGCAGTAAACAACAAGCAGAGGAATTACT GAATAAACTGGCAAAACCTTTTCAGGAATGTGGACTGGAATTACATCCGGAGAAAACGAAAATAGTTTACTGCAAAGACA GCGAACGACAGGCGAACCACGAAACAGTGCAGTTTAATTTTCTGGGGTATACGTTCAGAGCGCGAAGAGCACGTAATCAG CGAAGGGGAAATCTCTTTACGAGTTTCAGTCTGGCGGTGAGTAACAGTGCGCAGAAAGACATGATCGGAAAACTCAGGAA ACTGCGGCTCAGACGCAGGGTGGAAATGAGTCTTGAAGATATTGCGAAAAGGCTGAATCCGATGATATCGGGGTGGCTGA ATTATTACGCGAAATACTACAAGTCAGCGATGAAGAAAGTATGCAGATATATTAATCTGACGCTGATTGCGTGGGCGAGA AAGAAATACAAGACCCTGCGGTATAAAAAGACGAAGGCGTGTCAGTTAATGGAAAGACTGTCGAAAGAGAAGCTGGAGCT ATTTGCCCACTGGAAAGCAGGACCAGGAAGCGCGTTTGCCTGA Protein sequence : MNVERRGSVGQSASQPNCKQEEAAGEQTKPFQVSKLHVVEAYRRVKANAGAAGVDNQTLKDFERDLKGNLYKIWNRLSSG SWMPPPVRAVEIPKKDGSKRLLGIPTVSDRIAQMTVLVTFEPLVERYFLNDSYGYRHGKSALDAIAVTRKRCWQYDWYLE FDIKGLFDNIPHDLLLRAVDKHCADKWVRLSIRRWLTAPVQMPDGTLKERNKGTPQGGVISPVLANLFLHYVFDKWLSLL YPEIPWCRYADDGLIHCGSKQQAEELLNKLAKPFQECGLELHPEKTKIVYCKDSERQANHETVQFNFLGYTFRARRARNQ RRGNLFTSFSLAVSNSAQKDMIGKLRKLRLRRRVEMSLEDIAKRLNPMISGWLNYYAKYYKSAMKKVCRYINLTLIAWAR KKYKTLRYKKTKACQLMERLSKEKLELFAHWKAGPGSAFA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13526.1 | reverse transcriptase | Not tested | PAGI-7 | Protein | 4e-83 | 48 |
| unnamed | CAD33771.1 | putative reverse transcriptase | Not tested | PAI I 536 | Protein | 6e-67 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EcolC_2197 | YP_001725163.1 | RNA-directed DNA polymerase | VFG1512 | Protein | 3e-67 | 47 |
