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Name : EcolC_1237 (EcolC_1237) Accession : YP_001724230.1 Strain : Escherichia coli ATCC 8739 Genome accession: NC_010468 Putative virulence/resistance : Unknown Product : integrase family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 1356303 - 1357508 bp Length : 1206 bp Strand : - Note : PFAM: integrase family protein; KEGG: ypp:YPDSF_3775 phage integrase DNA sequence : TTGAGCAAGACACCACTGACAGCAAAGGCCATAGATGCCGCACAACCACAGGACAAGCCCTACAAACTCACAGATTCACA AACGCCAGGCCTTTTCTTGCTGGTCCATCCCAACGGTAGTAAGTACTGGCGATTCCGGTACTGGATAGATAAGAAAGAGC GATTACAGGCCGTCGGGGTATATCCGCTGATTAGCCTCAAGGAAGCCCGCAAACGCGCCACAGAGAGCCGTTTACTGATA GCCCAGGGAATTGACCCAATGGAAGAAGCGCGCAAGGAGAAAGCCATTGATGCGCTCAACATGGCGGCAAGTTTTAAGAC CGTGGCGGAGGACTGGCTTGCTACCAGGGTTAGCGGTTGGTCAGAGTCCTACACGAAACAGGTCAGATCGGCACTGGAGA AAGACGTTTATCCGGTACTTGGCAAGCGTTCAATCGTCGATATAACGGCCCGTGATGTTCTGTCATTGCTTCAGAAGAAA GAGCGCACCGCACCGGAACAAGCCAGGAAGCTACGCCAGCGTATCGGGGAGATCTTCAAATTTGCCGTTATCACCGAACT GGTTAACCGGAATCCGGTTGCAGATCTGGATACGGCATTGAAAGCCAGACGCCCAGGCCATAACGCATGGATACCGATTA GTGAAATTCCGGCATTCTACAAAGCCCTTGAGAGAGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATCCTC ACGGCTTTGAGGACGGCAGAGCTTCGTTTAATGCGCTGGGAGTGGGTGGATCTGGAGTCGGCAACAATCACCCTACCCGC TGAAGTCATGAAGGCCCGCCGACCGCATGTAGTCCCGTTATCCCGGCAAGCGGTCGAGCTATTACAGGACCAGTTTACCC GCAGCGGATACAGTGCTTTCGTCTTTCCGGGCCGATTCATGGATAAGCCATTGTCAGCCAGTGCGATCCTTAAAGCCCTG GAGCGTATCGGGTACAAGTCGATCGCCACTGGTCATGGCTGGAGGACAACGTTCAGCACATCACTTAACGAAAGCGGCAG ATACAATCCCGACTGGATCGAAATCCAACTGGCCCACGTTCCGAAAGGTGTGCGCGGCGTTTATAACCAGGCGGCCTATC TGAAGCAACGGCGGGCCATGATGCAGAACTACAGCGACGCCATCGACCAGATATTGGCTGGTGACGGTAATCCACTTGAA CCGTGA Protein sequence : MSKTPLTAKAIDAAQPQDKPYKLTDSQTPGLFLLVHPNGSKYWRFRYWIDKKERLQAVGVYPLISLKEARKRATESRLLI AQGIDPMEEARKEKAIDALNMAASFKTVAEDWLATRVSGWSESYTKQVRSALEKDVYPVLGKRSIVDITARDVLSLLQKK ERTAPEQARKLRQRIGEIFKFAVITELVNRNPVADLDTALKARRPGHNAWIPISEIPAFYKALERAGSVQIQTAIRLLIL TALRTAELRLMRWEWVDLESATITLPAEVMKARRPHVVPLSRQAVELLQDQFTRSGYSAFVFPGRFMDKPLSASAILKAL ERIGYKSIATGHGWRTTFSTSLNESGRYNPDWIEIQLAHVPKGVRGVYNQAAYLKQRRAMMQNYSDAIDQILAGDGNPLE P |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AFX83955.1 | integrase | Not tested | SE-PAI | Protein | 6e-75 | 45 |
| int | CAC39282.1 | integrase | Not tested | LPA | Protein | 2e-74 | 43 |
| aec33 | AAW51716.1 | Int | Not tested | AGI-3 | Protein | 1e-74 | 43 |
| int | AAD44730.1 | Int | Not tested | SHI-2 | Protein | 2e-73 | 43 |
| S4835 | NP_839238.1 | integrase | Not tested | SHI-2 | Protein | 4e-73 | 43 |
| SF3698 | NP_709437.1 | integrase | Not tested | SHI-2 | Protein | 4e-73 | 43 |
| int | AAD54663.1 | Sai integrase | Not tested | SHI-2 | Protein | 3e-73 | 43 |
| ESA_03025 | YP_001439090.1 | hypothetical protein | Not tested | Not named | Protein | 5e-69 | 42 |
| intL | NP_290239.1 | integrase for prophage 933L and the LEE pathogenicity island | Not tested | LEE | Protein | 2e-72 | 42 |
| ECs4534 | NP_312561.1 | integrase | Not tested | LEE | Protein | 2e-72 | 42 |
| int | AAC31482.1 | CP4-like integrase | Not tested | LEE | Protein | 2e-72 | 42 |
| int | ACU09430.1 | integrase | Not tested | LEE | Protein | 2e-72 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EcolC_1237 | YP_001724230.1 | integrase family protein | VFG0598 | Protein | 2e-73 | 43 |
| EcolC_1237 | YP_001724230.1 | integrase family protein | VFG0783 | Protein | 1e-72 | 42 |
