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Name : EcolC_1063 (EcolC_1063) Accession : YP_001724057.1 Strain : Escherichia coli ATCC 8739 Genome accession: NC_010468 Putative virulence/resistance : Unknown Product : integrase family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 1155680 - 1156876 bp Length : 1197 bp Strand : - Note : PFAM: integrase family protein; KEGG: esa:ESA_00630 hypothetical protein DNA sequence : TTGGCAAGAACGACACGCCCCCTGACCAACACAGAAGTACTGCGCGCTAAAGCGTTAGAAAAGGATCTAACGTTGCATGA TGGCGATGGTCTTTTTCTACTCGTTAAAACGAACGGTAAGAAGTTATGGCGTTTCCGTTATCAACGTCCGGCAACAAAGC AACGGACAATGATGGGGCTAGGAGCCTTCCCAGCCCTTTCACTTGCTGACGCCCGACGCTTAAGAGCGGATTACCTTTCC TTGTTAGCCAACGGAATTGACCCGCAAATTCAAGCTGAAATTGCAGAGGAACAGCAGCAAATCGCACAGGACAGTATTTT CTCGACGGTCGCCGCTAATTGGTTTCAGCTCAAAAGCAAAAGTGTTACCCCTGATTATGCAAAAGATATTTGGCGCTCAT TGGAAAAAGATGTATTCCCCGCCGTTGGTGAGATGCCCGTTCAGCAGATCAAAGCTAGAACATTGGTCGAAGCACTTGAG CCAGTCAAAGCTCGTGGGGCATTAGAGACTGTACGTCGTCTGGTGCAACGCATTAACGAAATAATGATTTATGCGGTTAA CACTGGCTTGATTGATGCAAACCCAGCATCAGGTGTTGGCATGGCCTTCGAAAAGCCAAAAAAACAAAACATGCCGACGC TTCGACCTGAAGAATTACCAAAGCTGATGCGTTCTTTAGTCATGTCAAATCTGTCTATCCCGACTCGCTGTCTAATTGAA TGGCAACTCCTGACTCTTGTGCGCCCTTCTGAAGCCTCCAGTACTCGGTGGGAAGAAATCGATCTTCATGCAAAGCTCTG GACGATTCCTGCCGAACGGATGAAGGCTAAACGGGAACACATAATTCCTCTATCATCTCAGGCATTAGAGATTCTTAATG TGATGAAGCCTATTAGTGCTCATCGTGAATATGTTTTTCCGAGTCGGAATGACCCAAAGAAACCAATGAACAGTCAGACT GCAAATGCAGCTTTAAAACGTATTGGTTTTGGCGGAAAATTAGTTGCCCATGGATTACGTTCAATAGCAAGTACAGCCAT GAATGAAGCTGGATTAAATCCTGATGTTATCGAGTCTGCCTTAGCCCACAGTGATAAAAATGAAGTTAGAAAAGCATACA ATCGTTCTACTTATCTCGTGCAGCGAATTGAATTGATGGATTGGTGGGGAGAATACGTTAAAAATAAAAGGGGTTAA Protein sequence : MARTTRPLTNTEVLRAKALEKDLTLHDGDGLFLLVKTNGKKLWRFRYQRPATKQRTMMGLGAFPALSLADARRLRADYLS LLANGIDPQIQAEIAEEQQQIAQDSIFSTVAANWFQLKSKSVTPDYAKDIWRSLEKDVFPAVGEMPVQQIKARTLVEALE PVKARGALETVRRLVQRINEIMIYAVNTGLIDANPASGVGMAFEKPKKQNMPTLRPEELPKLMRSLVMSNLSIPTRCLIE WQLLTLVRPSEASSTRWEEIDLHAKLWTIPAERMKAKREHIIPLSSQALEILNVMKPISAHREYVFPSRNDPKKPMNSQT ANAALKRIGFGGKLVAHGLRSIASTAMNEAGLNPDVIESALAHSDKNEVRKAYNRSTYLVQRIELMDWWGEYVKNKRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| int | AAK20773.1 | integrase | Not tested | VPI | Protein | 3e-100 | 52 |
| VC0847 | NP_230494.1 | phage family integrase | Not tested | VPI-1 | Protein | 4e-100 | 52 |
| int | AAK20803.1 | integrase | Not tested | VPI | Protein | 3e-100 | 52 |
| VC0395_A0372 | YP_001216328.1 | phage family integrase | Not tested | VPI-1 | Protein | 4e-100 | 52 |
| unnamed | AAA82714.1 | integrase | Not tested | VPI | Protein | 3e-100 | 52 |
| VC0516 | NP_230167.1 | phage integrase | Not tested | VSP-2 | Protein | 2e-96 | 51 |
| VC1758 | NP_231394.1 | phage family integrase | Not tested | VPI-2 | Protein | 7e-83 | 47 |
| VC0395_A1357 | YP_001217300.1 | phage family integrase | Not tested | VPI-2 | Protein | 7e-83 | 47 |
| VPI2_0001 | ACA01818.1 | phage family integrase | Not tested | VPI-2 | Protein | 3e-83 | 47 |
| int | AAD44730.1 | Int | Not tested | SHI-2 | Protein | 6e-64 | 42 |
| int | CAC39282.1 | integrase | Not tested | LPA | Protein | 1e-62 | 41 |
| aec33 | AAW51716.1 | Int | Not tested | AGI-3 | Protein | 7e-63 | 41 |
| S4835 | NP_839238.1 | integrase | Not tested | SHI-2 | Protein | 9e-63 | 41 |
| SF3698 | NP_709437.1 | integrase | Not tested | SHI-2 | Protein | 9e-63 | 41 |
| int | AAD54663.1 | Sai integrase | Not tested | SHI-2 | Protein | 7e-63 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EcolC_1063 | YP_001724057.1 | integrase family protein | VFG1092 | Protein | 3e-83 | 47 |
| EcolC_1063 | YP_001724057.1 | integrase family protein | VFG0598 | Protein | 4e-63 | 41 |
