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Name : xerD (YPK_0920) Accession : YP_001719674.1 Strain : Yersinia pseudotuberculosis YPIII Genome accession: NC_010465 Putative virulence/resistance : Unknown Product : site-specific tyrosine recombinase XerD Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 1038281 - 1039180 bp Length : 900 bp Strand : + Note : site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers d DNA sequence : ATGAAACAGCAAGATAACCCGCTGATTGAACAATTTCTTGATGCTCTGTGGCTGGAACGAAATCTGGCAGAGAATACACT GGCGTCATACCGTTTGGATTTACATGCGCTGGTTGGATGGTTGACACACCATAACAGTGATTTATTGCGCGCCAGCCCGC AGGACTTGCAATCCTTCCTTGCTGAACGGATCGAGGGTGGCTATAAAGCCACCAGCTCGGCTCGTTTACTCAGTGCGATG CGCCGGTTATTTCAATATTTATACCGGGAGAAACTGCGTGAGGATGATCCGACTGCGCTGCTCTCTTCACCCAAATTACC GCAGCGCTTGCCGAAGGATTTAAGTGAGGCACAGGTCGATGCGTTACTTAACTCGCCCAATGTGGACATTCCCTTGGAAC TGCGCGATAAAGCAATGCTGGAAGTGCTCTATGCCACCGGCTTGCGGGTGTCAGAATTGGTCGGGCTGACCATCAGTGAT GTTAGTCTACGCCAAGGTGTGGTGAGAGTGATTGGTAAAGGGAATAAAGAGCGCTTGGTCCCCTTGGGGGAAGAAGCTGT GTATTGGATTGAGAACTATATGGAGCATGGCCGGCCTTGGTTGGTTAATGGCGCATCGCTGGATGTATTGTTCCCCAGTA ACCGTAGCCAGCAAATGACCCGTCAGACTTTCTGGCATCGCATCAAACACTATGCGATCCTTGCCGGTATTGATAGTGAA CGGCTTTCACCCCATGTGCTACGCCATGCCTTTGCCACGCATCTGCTGAATCACGGTGCCGATTTACGTGTAGTGCAAAT GTTACTGGGCCACAGTGATCTGTCGACAACTCAGATTTATACGCATGTAGCGACTGAACGTTTGAGACAGCTACATCAAC AGCATCATCCACGCGCTTAA Protein sequence : MKQQDNPLIEQFLDALWLERNLAENTLASYRLDLHALVGWLTHHNSDLLRASPQDLQSFLAERIEGGYKATSSARLLSAM RRLFQYLYREKLREDDPTALLSSPKLPQRLPKDLSEAQVDALLNSPNVDIPLELRDKAMLEVLYATGLRVSELVGLTISD VSLRQGVVRVIGKGNKERLVPLGEEAVYWIENYMEHGRPWLVNGASLDVLFPSNRSQQMTRQTFWHRIKHYAILAGIDSE RLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 3e-62 | 56 |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 3e-62 | 56 |
