Gene Information

Name : YPK_0882 (YPK_0882)
Accession : YP_001719636.1
Strain : Yersinia pseudotuberculosis YPIII
Genome accession: NC_010465
Putative virulence/resistance : Unknown
Product : integrase family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1008807 - 1009748 bp
Length : 942 bp
Strand : -
Note : PFAM: integrase family protein; KEGG: stt:t3400 probable bacteriophage integrase

DNA sequence : 
ATGGCATATGAGCAATTCATTATGAATGAATCTGCAAATAAGCCTTGGATGGGTGATAAACCAGATACCCGATGCCTAAA
AGAATTAACTGACCTATGGTTTGCTTTACATGGACGCTCACTTTCCTCTGGAGATAAGATTCACAGCAAACTGAGATTGG
TTGCAGATGCATTAGGTGATCCAATAGCTGTAAATTTCACGGCAAAGGACTTCGCCCATTACCGCAACAAAAGACTGACA
GGTGAAATAAAACTAGATGAGCGCTTTGTTAAAGGCTCTAGCCCTGTAACCATAAATCTAGACCATTCATATCTCAGCGC
TATGTTTGAAGAATTGATACGTTTGGAAGAATGGAAATTACCTAATCCGCTTGAAAAATTGCGTAAATTTACGATTAGTG
AAAGAGAAATGGCGTGGCTTGACATTGATCAGATTAATGAGCTTTTGGCGGCTACAAGTCATCATATTGATATGAATCGT
GTTATCCGGGTTTGTCTATGTACCGGGGCGCGCTGGAGTGAGTCACAGTTTTTAACAAAGAATCAATTAAGCCCAAACAA
AATTACCTTTACTAAAACCAAGGGCAAAAAAAATAGAACGGTACCTATTTCTGCTGATTTTTATGAAGAGCTGAAAGAGA
TTAAAAGTGAGCGGTTATTTGGTGACTGTTACTACCCTTTCTTAACCATTTTGAATAACTCATCAATTGTTTTACCAAAA
GGGCAGTTAACACATGTTCTCAGACACTCATTTGCGGCGCATTTTATGATGAATGGCGGCAACATTTTGGTACTTCAAAA
GATACTCGGACATCATGATATAAACATGACTATGCGTTATGCCCATTTCGCACCTGAGCATTTAGATACAGCAGTAACGT
TTAACCCCCTCGCCATGGTAAATAATGGCGGCAAATTGGCGGCAAAAAATGGTACTCACTAG

Protein sequence : 
MAYEQFIMNESANKPWMGDKPDTRCLKELTDLWFALHGRSLSSGDKIHSKLRLVADALGDPIAVNFTAKDFAHYRNKRLT
GEIKLDERFVKGSSPVTINLDHSYLSAMFEELIRLEEWKLPNPLEKLRKFTISEREMAWLDIDQINELLAATSHHIDMNR
VIRVCLCTGARWSESQFLTKNQLSPNKITFTKTKGKKNRTVPISADFYEELKEIKSERLFGDCYYPFLTILNNSSIVLPK
GQLTHVLRHSFAAHFMMNGGNILVLQKILGHHDINMTMRYAHFAPEHLDTAVTFNPLAMVNNGGKLAAKNGTH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4645 NP_458725.1 phage integrase Not tested SPI-7 Protein 2e-69 49
t4338 NP_807932.1 phage integrase Not tested SPI-7 Protein 2e-69 49