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Name : YPK_0788 (YPK_0788) Accession : YP_001719542.1 Strain : Yersinia pseudotuberculosis YPIII Genome accession: NC_010465 Putative virulence/resistance : Virulence Product : major facilitator transporter Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 895833 - 897056 bp Length : 1224 bp Strand : + Note : PFAM: major facilitator superfamily MFS_1; KEGG: yps:YPTB3262 MFS family efflux protein DNA sequence : ATGCGCATATCCTCAGAGTCTGACGCTCGCTCAAGCGGGCTTACATCGTCTACCCATTGGCCTTTAGCGTTCTGCGTTGG GTTACTGGGCATCGGGCAAAACGGTTTATTAGTGGTGTTACCGGTATTGGTAAGCCGCACTCATCTGTCATTGTCGGTGT GGGCGGGTCTATTGACACTTGGCTCAATGCTATTTTTAGTGGGATCGGCATGGTGGGGCCGGCAATCGGAGATCCGTGGC TGCAAATTTGTTGTCATCATGGCACTGGCAGGTTACTTGCTTAGCTTTGTTTTATTGGCGCTGGCGGTGTGGGGGTTGTC AGCAGGGTGGTTATCGGAAATGGCCGGTCTGGGCTGGCTAATCGTGGCTCGTATTATTTATGGCCTGACCGTCTCTGGTA TGGTGCCCGCTAGCCAGACCTGGGCACTACAGCGTGCCGGTTATGAGCAACGGATGGCGGCGCTGGCGACCATCAGTTCG GGGCTGAGCTGTGGCCGTCTGCTCGGCCCATTGTGTGCCGCCCTCGCGCTCTCAATACACCCGATAGCCCCCCTGTGGCT GATGGCAATTACACCACTGATCGCACTGCTGGTGGTGTATCGCCAATACAATGACCCGCCGTTACCCCCAGTGGTGCATC AACAAAATCGTTTACGCCTCAATATGTTGCCTTATTTACTGTGCGCGTTGTTGCTGGCAGCAACTGTCAGCCTGATGCAA CTTGGCCTGGCACCTCACCTAAGTCAATTGTTTAGCCATTCGGCCACCACGGTGAGCCACCACGTGGCCATTTTGCTTAG CATAGCCGCGGGTTGTACGTTGCTGGCACAGTTTCTGGTGGTTCGCCCACAACGTTTTACGCCACCTCAGTTGCTGCTAG TGGCAGCCTTGCTCATGGTGCTTGGCTTGGGGCTGATGTGTGTTCAACCGCTGGTATTATTCTATCTAGGTTGTGCGCTG GCTTCTTTCGGCACCGCGATGGCGACACCGGGTTACCAACTGATGTTGAACGACCGGTTATCTACTGGCAAAGGCTCCGG CGTGATCGCTACCAGCCATACATTGGGCTATGGCATAAGTGCATTGATGGTGCCGGTAGTCGCAAAATTTTATGGTGAGT CACAACTGATGGTCGCGGCGTTCATGATGGCCATTTTGTTGGGGGGGATCAGTGGCTGGCTGTGGTGTCAGCATCGAACA ACCGCCCATTCTGTGGGAGAGTAA Protein sequence : MRISSESDARSSGLTSSTHWPLAFCVGLLGIGQNGLLVVLPVLVSRTHLSLSVWAGLLTLGSMLFLVGSAWWGRQSEIRG CKFVVIMALAGYLLSFVLLALAVWGLSAGWLSEMAGLGWLIVARIIYGLTVSGMVPASQTWALQRAGYEQRMAALATISS GLSCGRLLGPLCAALALSIHPIAPLWLMAITPLIALLVVYRQYNDPPLPPVVHQQNRLRLNMLPYLLCALLLAATVSLMQ LGLAPHLSQLFSHSATTVSHHVAILLSIAAGCTLLAQFLVVRPQRFTPPQLLLVAALLMVLGLGLMCVQPLVLFYLGCAL ASFGTAMATPGYQLMLNDRLSTGKGSGVIATSHTLGYGISALMVPVVAKFYGESQLMVAAFMMAILLGGISGWLWCQHRT TAHSVGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| shiF | YP_002414047.1 | putative membrane transport protein, major facilitator superfamily | Not tested | Not named | Protein | 2e-65 | 58 |
| imm | NP_839224.1 | membrane transport protein | Not tested | SHI-2 | Protein | 5e-66 | 58 |
| imm | NP_709453.1 | membrane transport protein | Not tested | SHI-2 | Protein | 5e-66 | 58 |
| unnamed | AAD54670.1 | unknown | Not tested | SHI-2 | Protein | 9e-66 | 58 |
| shiF | AAD44744.1 | ShiF | Virulence | SHI-2 | Protein | 4e-66 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| YPK_0788 | YP_001719542.1 | major facilitator transporter | VFG0614 | Protein | 2e-66 | 58 |
