|
Name : YPK_0067 (YPK_0067) Accession : YP_001718834.1 Strain : Yersinia pseudotuberculosis YPIII Genome accession: NC_010465 Putative virulence/resistance : Unknown Product : Integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 75893 - 76648 bp Length : 756 bp Strand : + Note : PFAM: Integrase catalytic region; KEGG: yps:pYV0019 putative transposase DNA sequence : ATGATGCAGAGCCGCACTGTATACAACTATCGTAGCCATCGTGACGATCGGGCTATTACTCAGCGAATACGGGAAATTGC GGAGACGCGCATCCGTTATGGCTGTCCGCGCATTCATATCCTGCTGCGGAGAGAAGGCTGGCTTGTTAACCATAAGAAAA CGCACCGTATTTACTGTCTTGAGGGTCTCAATCTACGTTCGAAACGTCCACGGCGGCATGTGACAGCGAAGCACAGGCAC GCACGTCCAGAAGTGACCGCGTTAGAGCAGTGCTGGAGCATGGATTTCGTTGCTGATAATCTGTTCAACGGGCGTCGGGT CAGGGCGCTAACTATAGTGGATAATTTTAGTCGTGAATGTCTGGCGATCGAGGTCGGTCAGGGGTTACGTGGAGATGATG TTGTGGCTGTCATGGACAGATTAAAACATTCGCTGGGGCGTATTCCACAAAGGCTGCAGACAGATAACGGCAGCGAATTC ATCTCGAAGTCGATGGACCGATGGGCGTATGAAAACAGGGTCACGATGGACTTTTCACGCCCCGGAAAGCCTACAGATAA TGCCTTTATCGAGTCATTTAATGGCAGTCTGAGGGATGAATGTCTGAACGTGCACGGGTTCCTTTCTCTGGAAGATGCTC AGGAGAAAATTGAACAATGGCGGCAAGAATATAATCATTTTCGTCCGCATTCTTCGTTAAATAACCTGGCTCCGGCAGAA TTTGCCCGAAGTCATCAAAAAGGTCCGGATCTCTGA Protein sequence : MMQSRTVYNYRSHRDDRAITQRIREIAETRIRYGCPRIHILLRREGWLVNHKKTHRIYCLEGLNLRSKRPRRHVTAKHRH ARPEVTALEQCWSMDFVADNLFNGRRVRALTIVDNFSRECLAIEVGQGLRGDDVVAVMDRLKHSLGRIPQRLQTDNGSEF ISKSMDRWAYENRVTMDFSRPGKPTDNAFIESFNGSLRDECLNVHGFLSLEDAQEKIEQWRQEYNHFRPHSSLNNLAPAE FARSHQKGPDL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| XCV0439 | YP_362170.1 | ISRSO12 transposase (fragment) | Not tested | Hrp PAI | Protein | 1e-51 | 55 |
| unnamed | ABR13352.1 | insertion sequence IS407 OrfB | Not tested | PAGI-5 | Protein | 1e-38 | 48 |
| unnamed | ABR13540.1 | insertion sequence IS407 OrfB | Not tested | PAGI-8 | Protein | 2e-45 | 46 |
| trp1400B | CAB46580.1 | IS1400 transposase B | Not tested | HPI | Protein | 1e-42 | 44 |
| EXB25 | ABD94712.1 | hypothetical protein | Not tested | ExoU island B | Protein | 7e-26 | 42 |
