|
Name : YPK_0571 (YPK_0571) Accession : YP_001719327.1 Strain : Yersinia pseudotuberculosis YPIII Genome accession: NC_010465 Putative virulence/resistance : Unknown Product : polypeptide-transport-associated domain-containing protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG2831 EC number : - Position : 629333 - 631021 bp Length : 1689 bp Strand : + Note : PFAM: Hemolysin activator HlyB domain protein; Polypeptide-transport-associated domain protein ShlB-type; KEGG: ypp:YPDSF_0385 hemolysin activator protein DNA sequence : ATGTCGCGTTTTTATTATTCTATATTAGTGGCTGGCGTATTATTGAAAATAGTGGCTATTCCAGATGCCAGTTATGGCGC GGAATTAGCGCCCGTTCAACAAAGTATTCACCAACAGGAGCGGCAACGGGCACTTGAAGAGCGCCTGGCTCCGCCGACGC CGGATGTGCGCTTATCTGCGCCCTCGGCCTTTTTTAGACGTATTATTTTTCCGCTGGAGACACCCTGCTTTGTTATTAAT CGGATAAAAATCAGTGGGGCCGAGCCATTACCCCGTTGGTTGCCGTTGCAACGCATTGCCGATCAAGCGCAAGGCCAGTG TCTGGGGGCCAAGGGCATTAACCTGCTAATGAGTCAGATGCAAAACCGTTTGGTCGATCACGGCTATGTGACTACCCGAG TGCTGGCCCCACAGCAGGATTTAAACAGCGGCACGCTGGCGCTAAACGTCGTGCCCGGCAAAATACGCGGTGTGGAACTG ACGCCAGACAGTAATAGGTATGTCACGTTATTCAGCGCTTTTCCTGCCCGTGCCGGGACGCTGTTGGATTTACGCGATAT CGAACAAGGCTTGGAAAATCTACAGCGTGTTCCCACGGTGCAAGCCAATATGGTGTTGATCCCAGGCTCTGCCCCCGGTG AGACGGATATCATTCTGAACTGGCAACAGCGAAAAATGTGGCGGCTGGCCGCCTCACTGGATGATTCGGGTACCCGCAGC ACTGGCCGCTATCAAGGGGGGGCGACGTTGTTTCTGGATAACCCGCTTTCTCTGAGTGATCTTTTTTATGTCTCAGCTGG TGGCGCACTGCAACGCCGTGGCGATAAAGGCACGAATAATCTGACCGGCCATTACTCATTGCCATTCGGTTATTGGACCG CAGGCATGACCGCCAGCCGTTATGACTATTACCAGGCCGTTGCGGGCCTGAATGGCGATATCAACTACCGAGGTGAAAGT GAGAACGTGGCGTTCCAACTCAGCCGGTTGTTGCACCGTAATGCCAGCCAGAAAACCACCTTTACCTACGATGTGCTAAC CCGCTCGTCGAAAAACTATATCAACGATACCGAAGTGGAAGTGCAGCGCCGCCACACCTCGGCCTGGCGGATCGGGCTAC AACACCGCCACTTTATCTCGCAGGCGATTTTGGATGCCGGTATCAGCTATCAGCGTGGCACCCGCTGGTTTGGTGCCATA CCCGCGCAGGAAGAGTATTTCGGCGAAGCCACCGCCTTGAGCAAAATTCTGCGATTGAATGCGCAACTGGATATTCCTTT TGCGGTTATGGCGCAAAACCTCCATTACAACCTGCAATATCAGCGCCAAAGTACCAACACGCCACTGACGCCGCAGGATC AGTTCTCCATTGGTGGCCGCTGGTCGGTGCGTGGTTTTAATGGTGAGCGCACGCTGATTGCCGATCGCGGCTGGTGGGTG CGCAATGATATCGGCTGGTATCTGCCGCTACCGGGGCATGAGCTGTATGTCGGTGTGGATTACGGCGAAGTCGGTGGTCG TAGTGGCGCTTATCTGTTGGGCCGCCATTTGGCGGGCAGTGCCGTCGGGGTACGTGGCAACGTACTGAATACCCGCTATG ACCTGTTTGCGGGGAAACCGCTCTCTAAACCTAATGGTTTCAAAACCGATTCGCTGGCGGTGGGCTTTAACCTGAATTGG CTGTACTGA Protein sequence : MSRFYYSILVAGVLLKIVAIPDASYGAELAPVQQSIHQQERQRALEERLAPPTPDVRLSAPSAFFRRIIFPLETPCFVIN RIKISGAEPLPRWLPLQRIADQAQGQCLGAKGINLLMSQMQNRLVDHGYVTTRVLAPQQDLNSGTLALNVVPGKIRGVEL TPDSNRYVTLFSAFPARAGTLLDLRDIEQGLENLQRVPTVQANMVLIPGSAPGETDIILNWQQRKMWRLAASLDDSGTRS TGRYQGGATLFLDNPLSLSDLFYVSAGGALQRRGDKGTNNLTGHYSLPFGYWTAGMTASRYDYYQAVAGLNGDINYRGES ENVAFQLSRLLHRNASQKTTFTYDVLTRSSKNYINDTEVEVQRRHTSAWRIGLQHRHFISQAILDAGISYQRGTRWFGAI PAQEEYFGEATALSKILRLNAQLDIPFAVMAQNLHYNLQYQRQSTNTPLTPQDQFSIGGRWSVRGFNGERTLIADRGWWV RNDIGWYLPLPGHELYVGVDYGEVGGRSGAYLLGRHLAGSAVGVRGNVLNTRYDLFAGKPLSKPNGFKTDSLAVGFNLNW LY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| S1 | AAQ19124.1 | putative hemolysin activator HlyB | Not tested | PAI I CL3 | Protein | 3e-169 | 64 |
