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Name : YPK_0510 (YPK_0510) Accession : YP_001719266.1 Strain : Yersinia pseudotuberculosis YPIII Genome accession: NC_010465 Putative virulence/resistance : Virulence Product : D-arabinose 5-phosphate isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.3.1.13 Position : 560789 - 561862 bp Length : 1074 bp Strand : - Note : KEGG: ypm:YP_3832 putative isomerase; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS) DNA sequence : ATGCTCAGGAAGGCTTGGAGCGAAAGCAACCAACACACCTACAGCGTGAAAGATGACGGTAATACCAACATTGGGCGGAT ATTAAGTATGTCTACTTTTGATTTACAGCCGGGCGTGGATTTCCAGCAGGCAGGTAAGCAGGTACTTCAGATTGAACGCG AAGGGCTGGCTCAACTCGATCAATACATAAACGAGGATTTCTCCAGAGCCTGTGAGGCCATTTTTCGTTGCCACGGCAAA GTCGTCGTGATGGGAATGGGCAAATCTGGTCATATTGGCTGCAAAATTGCAGCCACATTCGCCAGCACGGGCACACCTGC ATTTTTTGTCCATCCTGGTGAAGCCAGCCATGGCGATTTGGGCATGATCACGCCACAAGATATTGTATTAGCTATCTCTA ACTCTGGGGAATCCAACGAAATCCTCACGTTGATCCCCGTGCTTAAGCGCCAGAAAATTCTGTTGATTTGCATGAGCAGT AACCCTGAGAGCACCATGGGTAAAGCGGCCGATATTCACTTGTGCATTAATGTGCCACAAGAGGCCTGTCCGCTGGGGCT AGCGCCAACCACCAGTACGACTGCAACACTGGTTATGGGGGATGCGTTGGCGGTAGCCTTGCTCAAAGCACGGGGTTTCA CGCAGGAAGATTTCGCACTCTCTCACCCAGGTGGCGCGCTGGGGCGTAAGTTGCTGCTGCGGATCAGCGATATTATGCAT ACGGGTACGGAGATCCCCACCGTCAGCCCTGATGCATCATTACGTGATGCCTTGCTAGAAATTACTCGGAAAAGTCTGGG TTTGACCGTTATTTGTGACGATTCAATGAGGATTAAAGGTATCTTTACCGACGGTGACTTGCGCCGGGTATTTGATATGG GCATTGATCTGAATAATGCAAAAATTGCTGACGTCATGACTCGCGGGGGTATTCGAGTCCCTCCGAACATATTGGCGGTG GACGCGCTCAATCTGATGGAGTCACGCCATATCACTGCGTTGCTCGTCGCTGATGGTGACCAATTACTGGGTGTCGTACA TATGCACGATATGCTGAGAGCCGGTGTTGTCTGA Protein sequence : MLRKAWSESNQHTYSVKDDGNTNIGRILSMSTFDLQPGVDFQQAGKQVLQIEREGLAQLDQYINEDFSRACEAIFRCHGK VVVMGMGKSGHIGCKIAATFASTGTPAFFVHPGEASHGDLGMITPQDIVLAISNSGESNEILTLIPVLKRQKILLICMSS NPESTMGKAADIHLCINVPQEACPLGLAPTTSTTATLVMGDALAVALLKARGFTQEDFALSHPGGALGRKLLLRISDIMH TGTEIPTVSPDASLRDALLEITRKSLGLTVICDDSMRIKGIFTDGDLRRVFDMGIDLNNAKIADVMTRGGIRVPPNILAV DALNLMESRHITALLVADGDQLLGVVHMHDMLRAGVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 3e-51 | 43 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 1e-50 | 43 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 8e-51 | 43 |
