|
Name : hslU (YPK_4104) Accession : YP_001722816.1 Strain : Yersinia pseudotuberculosis YPIII Genome accession: NC_010465 Putative virulence/resistance : Unknown Product : ATP-dependent protease ATP-binding subunit HslU Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1220 EC number : - Position : 4535831 - 4537162 bp Length : 1332 bp Strand : + Note : heat shock protein involved in degradation of misfolded proteins DNA sequence : ATGTCTGAAATGACCCCACGCGAAATAGTTAGCGAACTTGATAGCCATATCATCGGCCAAGACAAAGCCAAGCGTGCGGT GGCTATCGCCCTGCGTAACCGCTGGCGTCGTATGCAGCTTAACGAAGAGCTGCGCCACGAAGTGACACCTAAAAATATTC TGATGATCGGGCCAACCGGTGTGGGTAAAACTGAAATTGCCCGCCGTCTGGCTAAATTGGCCAATGCCCCGTTCATCAAA GTTGAAGCCACAAAATTCACCGAAGTGGGTTATGTTGGTAAAGAAGTGGATTCTATCATTCGCGATCTAACCGATGCAGC CGTAAAAATGGTTCGCCATCAGTCTATCGAGAAAATGCGCTATCGGGCGGAAGAGTTGGCCGAAGAACGCATTTTGGATG TGCTCATCCCACCCGCCAAAAACAACTGGGGCGTACCGGATGAATCACAGGAGCCTTCTGCCACCCGTCAGACTTTCCGT AAGAAGCTGCGCGAAGGCCAACTGGATGATAAAGAGATTGAGATAGATCTGGCTGCGGCCCCGATGGGGGTTGAAATTAT GGCCCCCCCTGGCATGGAAGAGATGACCAATCAGTTACAATCCATGTTCCAGAATATTGCTGGCCAGAAACAGAAACCGC GCAAAATCAAAATCAAAGAAGCACTTAAGCTACTGATTGAAGAAGAAGCAGCAAAACTGGTTAATCCAGAAGAGCTGAAA CAGCAAGCGATTGATGCGGTTGAACAACACGGTATCGTGTTTATTGATGAGATCGATAAAATCTGTAAACGCGGCCAGAC TTCCGGCCCAGATGTCTCCCGTGAAGGGGTACAGCGTGACTTACTGCCACTGGTTGAAGGTTGTACCGTCTCAACCAAGC ACGGCATGGTGAAGACTGACCATATTCTGTTTATTGCATCTGGCGCATTCCAGGTTTCCAGTCCATCAGACTTGATCCCG GAGTTGCAAGGCCGTTTGCCAATCCGCGTAGAGTTACAAGCGCTGACAACAGATGACTTTGAACGCATCTTGACCGAGCC AAGTGCTTCATTAACCGAACAGTATAAAGCGCTGATGGCGACCGAAGGCGTTACCATCGAGTTTACTCGCGAGGGTATCC GTAAAATTGCTGAAGCGGCATGGCAGGTGAACGAACGTACCGAAAATATTGGTGCCCGCCGTTTACACACAGTGTTAGAG CGTCTGATGGAAGATATTTCCTATGACGCCAGCGAAAGCAGTGGTCAATCTATCACTATTGACGCGGAATACGTCGGTAA GCACTTAGATGAGCTGGTTGCGGATGAAGACTTGAGCCGTTTTATCCTATAA Protein sequence : MSEMTPREIVSELDSHIIGQDKAKRAVAIALRNRWRRMQLNEELRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIK VEATKFTEVGYVGKEVDSIIRDLTDAAVKMVRHQSIEKMRYRAEELAEERILDVLIPPAKNNWGVPDESQEPSATRQTFR KKLREGQLDDKEIEIDLAAAPMGVEIMAPPGMEEMTNQLQSMFQNIAGQKQKPRKIKIKEALKLLIEEEAAKLVNPEELK QQAIDAVEQHGIVFIDEIDKICKRGQTSGPDVSREGVQRDLLPLVEGCTVSTKHGMVKTDHILFIASGAFQVSSPSDLIP ELQGRLPIRVELQALTTDDFERILTEPSASLTEQYKALMATEGVTIEFTREGIRKIAEAAWQVNERTENIGARRLHTVLE RLMEDISYDASESSGQSITIDAEYVGKHLDELVADEDLSRFIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 2e-97 | 48 |
