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Name : YPK_0403 (YPK_0403) Accession : YP_001719161.1 Strain : Yersinia pseudotuberculosis YPIII Genome accession: NC_010465 Putative virulence/resistance : Unknown Product : YD repeat-containing protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3209 EC number : - Position : 442267 - 446439 bp Length : 4173 bp Strand : + Note : TIGRFAM: YD repeat protein; PFAM: RHS protein; YD repeat-containing protein; PAAR repeat-containing protein; KEGG: yps:YPTB3621 hypothetical protein DNA sequence : ATGTTTGAAGCGGCCCGTGTTGATGACAAGCTTTATCATTCCAGTGCCTTAGCGGGTTTTATTATTGGCTCCATTATTGG TGCCGCCGTGATTTTTGCGGCCGCGGCTTACGCCGCCTCCATTGTTCTCACCGGCGGGGCGACGCTGGTCGCTACCGGCT TTATTGTGGGTATGGGGGTGACCACGCTGGGCGTCGTTGCCGGTGGGTTAATACGCTCCGTGGGCGAAAAAATAGGGAGC ATGTGCCATCACGATGTCGGACAAATTACGACAGGGTCCAAAAACGTTAAAGTGAACAGTAAACGGGCGGCGCATGTCGA GCTCAGTACCGTGGCCTGTAAAGATGACTCCGCCATTCAGCGCATGGCCGAAGGTTCGTCAAATATCTTTATTAACAGTA AAGCCGCCGTTCGTCTGGAAGATAAAACGACCTGTGATGCGGTTGTCGATTCCGCTTCCAGCAATGTGACGTTTGGTGGG GGGCGCGTTCAGTATCTCGATATTAAACGCGAGATTTCTGATGAAATGCGTGATTTGTCAGAGAAGCTGTTTATTGTCGC CGGGCTGGCGGGCGGCATATTTGGGGCGGCAAAACAGGCGGGGTGTTTCGGCCTTAAATGCCTGAGCAAGATTGCGTTGG GTGAGATGGCCGGGGCGGCTGCCGGGTATGGGCTGGAAAAAGGGGTTGGGGCCATCGCCGGTTATTTCGGTTACCCGGTT GATGTGATCAGTGGACAGAAATTGCTGACAGGTGAGGGCGATGATACCGATTTTATTCTGCCGGGTATCTTCCCGCTGCA CTGGAGCCGGATTTATCGCAGTGAAAATCACCATGTCGGGGCGCTGGGACAAGGCTGGTCTCTGGTATGGGAGCGTTCAT TACGCAAAGAAGATGACAGCATTGTTTATCAGAATGATGAAGGTCGGGAGATTGTCTTTCCCCTGATTAAACGTGGAGAG CGCTATTTCTCCCCCACGGAGCATATCTGGCTGGCACGTACCGAGCGTGATACCTATGCCATCAGCAGCCCGTTTGAAAC CTGTTTTATTTTTGAGGCCTTTTCTGAGGCTGGCGTTGCGAAATTAGCCAGCCTCGAAGATCTCAATGGTCATGCCCTGT ATTTCTCTTATGACGATATCGGGCAACTGAAAAAAATATCGACCACCAGCGGTTATGGGGTGTATTGCCAGTATGAAAAA GGGCGTCTGGTGTCCGTTGCCTGCGTCAAGGGCGGTACGCCGGGCACACTGGTCCGCTACCAGTATAATGAACAGCACCA GTTGGTCAGCGTCACTAACCGTGAGGGGCAAATCACCCGCCAGTTTGGTTACCATGGCCATCTGATCAACAAACTGGCGG ATGTCAGGGGGCTGGAGTGCCGTTACACATGGGCTGATATCGGCGGAACCCCGCGAATTACGCACAGTGCCACCAATCTG GGGGAGCAGTGGCAGTTTGATTATGATATCGACAATCAACAGACCACCCTGACGGACCTCAATACCGGGCAGACCGCCTG CTGGGGATATAACGCCCAACATTTAATTACCGACTATCGGGATTTTGATGGCGGGAAATATGCATTTGACTACAACGACC TCAATATGCCGGTACGCGTTGTGCTGGCAGGCGAGAGAACGCTCGTTCTGGTTTACGATGCACTGGCGCGCCCGATCCAG ATCACCGATCCGCTAAAACGTGAAACCCACATTGATTATCACCGTAACAGTCTGCGGGTGGTGCGCCGTCAGTACCCTGA CGGGCAGGTCTGGAAGGGGGAATATGACCGTACCGGCCGTTTGCTGAAAGAGAACGCGCCGGATGGCGGGGTGACGCTTT ATCATTATCCAGGGGCCTCATCCCTTCCTGAACGCATAACCAATGCCGTAGGGGCGCAGACACACCTTGGTTGGGAAAGG CACGGGCAACTGACGGAGCACACCGACTGCTCGGGTAAACTGACCCGCTACGAATATGATATCGATGGCCATCTGCTGAC GGTCATCGATGCTGAAAACCATTCAACACATTACAGCTACAACCGTCTCGGGCAGCCCACCGGGGTCAGGTACGCCGATG GCCGCAAAGAGCAGTTGCGGTATAACGCTCAGGGGCTGGTTGAACAGTTTACCGATCCTGTCGGGCGGCAGTTGCACTGG CGTTATAACCTGCGGGGTCAGCCGGTCAGCTTTACTGATCGTCTGCAACGGGAATACCGTTACCGCTATGACTGCCATGG GCAGATGATTGAGCTGGATAATGCCAATGGTGGCCAGTATCACTTCCGGTGGAGCAGTGGCGGGCAATTGGTGGAAGAGC AGTATCCCGATAACCTTGTCCGGCGTTATCGCTATGGGGAGAGCGGGATGCTGATGGCGCTGGAGACCACCGCGCCCACG GTTGACGATCTTACCGTCTCCCGGCAGGTCAGTTTTGACTATGATGCGGGCGGGCGAATGACGCAGCGCCTGACGGGCAT GAGTGCGACCCGGTATGACTGGGACATTATGGACCGTTTATTGTTGGCCGAGCGTGTGCCAACGGCGGTGGGCGAACAGG CGGGGATCGTCGGTCATGGTGTTCGTTTGGCGTATGACAAGGCCGGGCATTTACTGACGGAAAGCGGTGACCTGGGTGCG GTGACGTATCAGTGGGATCCGCTGCATCATCTGGCCGCCCTGACGCTGCCCGATGGTCAGACGCTGTCATGGTTGCGTTA CGGTGCGGGCCATGTCAGTGCCATTCGTCATGGTGATACGCTTATTTCCGAGTTCAGCCGGGATAATCTTCATCGGGAAG TGAGCCGGACCCAGGGTATTTTGACGCAGTATCGTGATTATGACGCGATGGGGCGGCGGTTGTGGCAATCGGCGGGTTCT GATGCGCCGACAGTGGCGGCCGATCTGCTGCCCCGTCAGGGGGATATCTGGCGTAAATTTAGCTTTGACACTGCCGGTGA ACTGAGCATGGCCACCGATTTTATCCGGGGTGAGCAGCAGTACCGTTATGATGCGGAAGGGCGGCTGACTGACAGCCGGG AGCGTCATCAGTTATCCGTTGCGGAGGATTTTGCTTACGACAATGCGGATAACCTGCTGAACCTGAGGAAACTGCCGTTT GACACGGTCGATCCACTGTACGATACACCGGTCGCCAACAACCGTTTGACGCAATGGCAGCATTACCGTTTTGAGTATGA TGCCTGGGGAAACATCACCACGCGGCATGCCGGTGGTCGGATGCAACATTTTGCCTATGACGATGATAACCGGCTGCTGC GGGCCTGGGGAACCGGGCCGTTAGGGGAGCATGACAGCCACTATCGGTATGATGCGCTGGGGCGGCGTATCCACAAATCG GTGACGATAAAGCGCGGCGCAGAAAAAACCACCCGTCAGACCGATTTTATCTGGCAGGGGTTGCGGTTATTGCAGGAGCA ACATGCGGACGGCAACGCGACCTATATTTACGACCCGAACGAAAGTTATACGCCGCTGGCGCGGGTCGATCAGCGTCATG GCGAGACAGAAAGTCAGGTGTATTATTTTCATACGGATATCAACGGTACCCCGCTGGATGTCACGGACGGAGAGGGTAAG CACCGCTGGTCAGGGAAATACCACGCCTGGGGCAAAGTTACCCGGCAGAATGTCAGCGATCCAAGGCAAAGCACGGTCAG CCGGTTCGCGCAGCCGCTGCGTTATCCGGGGCAATACAGTGATGACGAGACGGGTTTGCACTACAATACGTTCAGGTACT ATGACCCGGAGATAGGGCGATTTAGTACGCAGGACCCGATAGGGCTGGCGGGGGGGGTGAATCTTTATCAGTATGGGCCA AATCCGCTAGGTTGGGTGGATCCTTGGGGCTTGGCTACATATACATCATATGAGCAAGCAAGAAATGCAGCTCTAAAATG GCTACAAGATAGAGGGTTTAAGGCTGAAACTGAAAATCTTGGTCGTTTTGGTGATATAAAAGGCAAACCTGTTGGAATGC AAACGGGCAATGGAAAAGTTGGATTTAGGGTCGAGTTCGATGAGCGAAGTGGGGCTCATATTAATACATGGTCAGGTAAG GAAAAAGGTCCTCATTTCCAATTTGAAGCAAGTGAGAAAACTGTTAAAAAAATTCAAAAAGGATTTGATAAAAAAACGAA TGGAAGGTGCTAA Protein sequence : MFEAARVDDKLYHSSALAGFIIGSIIGAAVIFAAAAYAASIVLTGGATLVATGFIVGMGVTTLGVVAGGLIRSVGEKIGS MCHHDVGQITTGSKNVKVNSKRAAHVELSTVACKDDSAIQRMAEGSSNIFINSKAAVRLEDKTTCDAVVDSASSNVTFGG GRVQYLDIKREISDEMRDLSEKLFIVAGLAGGIFGAAKQAGCFGLKCLSKIALGEMAGAAAGYGLEKGVGAIAGYFGYPV DVISGQKLLTGEGDDTDFILPGIFPLHWSRIYRSENHHVGALGQGWSLVWERSLRKEDDSIVYQNDEGREIVFPLIKRGE RYFSPTEHIWLARTERDTYAISSPFETCFIFEAFSEAGVAKLASLEDLNGHALYFSYDDIGQLKKISTTSGYGVYCQYEK GRLVSVACVKGGTPGTLVRYQYNEQHQLVSVTNREGQITRQFGYHGHLINKLADVRGLECRYTWADIGGTPRITHSATNL GEQWQFDYDIDNQQTTLTDLNTGQTACWGYNAQHLITDYRDFDGGKYAFDYNDLNMPVRVVLAGERTLVLVYDALARPIQ ITDPLKRETHIDYHRNSLRVVRRQYPDGQVWKGEYDRTGRLLKENAPDGGVTLYHYPGASSLPERITNAVGAQTHLGWER HGQLTEHTDCSGKLTRYEYDIDGHLLTVIDAENHSTHYSYNRLGQPTGVRYADGRKEQLRYNAQGLVEQFTDPVGRQLHW RYNLRGQPVSFTDRLQREYRYRYDCHGQMIELDNANGGQYHFRWSSGGQLVEEQYPDNLVRRYRYGESGMLMALETTAPT VDDLTVSRQVSFDYDAGGRMTQRLTGMSATRYDWDIMDRLLLAERVPTAVGEQAGIVGHGVRLAYDKAGHLLTESGDLGA VTYQWDPLHHLAALTLPDGQTLSWLRYGAGHVSAIRHGDTLISEFSRDNLHREVSRTQGILTQYRDYDAMGRRLWQSAGS DAPTVAADLLPRQGDIWRKFSFDTAGELSMATDFIRGEQQYRYDAEGRLTDSRERHQLSVAEDFAYDNADNLLNLRKLPF DTVDPLYDTPVANNRLTQWQHYRFEYDAWGNITTRHAGGRMQHFAYDDDNRLLRAWGTGPLGEHDSHYRYDALGRRIHKS VTIKRGAEKTTRQTDFIWQGLRLLQEQHADGNATYIYDPNESYTPLARVDQRHGETESQVYYFHTDINGTPLDVTDGEGK HRWSGKYHAWGKVTRQNVSDPRQSTVSRFAQPLRYPGQYSDDETGLHYNTFRYYDPEIGRFSTQDPIGLAGGVNLYQYGP NPLGWVDPWGLATYTSYEQARNAALKWLQDRGFKAETENLGRFGDIKGKPVGMQTGNGKVGFRVEFDERSGAHINTWSGK EKGPHFQFEASEKTVKKIQKGFDKKTNGRC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YpsIP31758_3692 | YP_001402646.1 | RHS/YD repeat-containing protein | Not tested | YAPI | Protein | 0.0 | 41 |
| api89 | CAF28563.1 | putative membrane-bound sugar-binding protein | Not tested | YAPI | Protein | 0.0 | 41 |
