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Name : YPK_0399 (YPK_0399) Accession : YP_001719157.1 Strain : Yersinia pseudotuberculosis YPIII Genome accession: NC_010465 Putative virulence/resistance : Unknown Product : type VI secretion protein IcmF Function : - COG functional category : S : Function unknown COG ID : COG3523 EC number : - Position : 434601 - 438134 bp Length : 3534 bp Strand : + Note : TIGRFAM: type VI secretion protein IcmF; PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: ypi:YpsIP31758_0326 putative lipoprotein DNA sequence : ATGAAATTGCCGTTCTTTATACGCATAGCCAAGCCCGCCATTCCTCGCCTTAAAGCGTCAATACCGGTGGTATTGGCGTT GATGGCTTGTGCGGCACTCATTTGGGTATGGATTTACGGACCCGAGTGGCAATTGGGGGAAAATTACCCGTTTGAGACAT TATTGAGCCGTTGGTTGGTCACGGCGGTATTTGTTTTGGTGGCCGTTTGTTGGCTCAGCCTGAAAGTCATGAGGCGAGTA CAACACCTGGAAAAACTCCAACTGCAAACGAAAATTCAGCTCGACGACCCCGTCAGTGCTGATATCGAACAACAAAACCA CTACCTCAATGGCTGGAAGCACCAACTTCAGCGCCATTTGAACACCCCGGAATATCTGTATCACCTGCCCTGGTACATGG TCATTGGTGCGCGCAATAGCGGCAAAAGTACACTGATCAAAGAAGGGTATAAACTGACAGAGATCTCCGCATCCGAGCGG CTCCATGTGGAAGGCGCAGCAGATCTGCGCGTCCGCTGCTGGTTGGGGGAACAAGCGGTTATTATCGATCCTGCGGGGGT GCTGATTGAACAACCCACGACACCGATCGCGGGCAAAGCATCACTCAACAGCCGCTTATGGCAAAGTCTATTATCCTGGC TGATTGAACAGCGCCAGCGTCAGCCGCTAAACGGCATTATTCTCACCGTCGATCTTCATCAGATGATGACCGCGAATAAA GCGCAGCGGGAGACGTACGTCGCTGATATTCATCAACGGCTGCAAGAGATACGGCTGTCTTTGCACAGCCAGGTGCCGCT GTATGTGGTGTTCACCAAAATGGACCTGCTGTACGGCTTCGAGGCCATGTACCAATCGCTGGATAAAGCCGAACGTGAAG CGGTTCTGGGGGTGACGTTCAGCCTCAATGCGGCGGATCCGGACGTGTGGCGGACGGAGTTGAAACAGTTCTGGCAGCAA TGGGTCGCACAACTGAATGGCGCGATGCCGGACATGATGCTGAACAGTGTGGATGCCGGGCAGCGTAGCCAGTTGTTTAG CTTCACTCGTCAGATGCAGGGCCTGCACGATTACGTCGTGCAACTGCTGGAAGGCATTCTGTACCGTGGAGAACATGCCC AGCCGCTGTTACGGGGGGTTTATCTCACGTCTGCCCAGCAACGCGGGCAAATGGACGATATCTTTACCCAATCTGCCGCG GTGCAATATCACCTTGCGCCACAGGCCTTCCCGACCTGGCCGGTCTCGGATACGACGCCGTATTTTACCAAAGCGCTGTT TAATCAGGTGCTGTTGGCCGAACCCAATCTGGCCGGAGAGAACGGTATCTGGCTGCAAAAAACGAGAAAGCGAATGTTCA TTTTCTCGGGGGTGGGTGCCCTGGCCGCGCTGACCTTATGGGGCTACTGGCACTACTATCACCAGCTTAACTACCGGGCT GGCGAAGAGGTATTAACCCAGGCAAAAACCTTCTTATCGATCCCACCGCCAGAAGGCGATGACCGTTATGGCAATCTGCA ACTGCCGCTGCTAAACCCCATCCGTGACGCCACGCTGGCTTACGGTAATTACCATGAACGCAGCCCGTTCCTGGCGGATA TGGGGTTATATCAGGGCAATAATATCGGGCCTTATGTCGAAAGCACTTACTTGCAACTCCTACAGCAACGTTTTGTCCCG GCACTGATGAGCGGGCTGTTGGAACAACTGAACGCCGCACCGAAGGGCAGTGAAGAGAAACTGGAAATTCTGCGGGTGAT GCGGATGTTGGAAGACGGCAGTGGCCGCAATGCCGCGCTGGTTGAACAATATATGAGCCACCGCTGGAGCCAACAATTCA ACGGCCAGCGCGAGTTGCAGGAGCAACTGTCGAGCCACCTGAACTACGCACTGAAACACACCGACTGGCACGGCGCACGG GAAAGTGGCGATCAATATGCGATCAAGAGCTTTGTCCCGTATCTCAGCCCGATCCAGTCAGCGCAGCAAGAGTTGAGTAA ACTCTCGATCTACCAACGGGTGTATCAGAACCTGCGGATCAAAGCACAGGATGCGTTGCCGCCCGCGCTCGATTTGCGCG ATCAGATCGGCGCAAGTTTTGACGACATCTTTGTCTCCGGTAACGATCGCCTGCTGGTGATCCCGCAATTCCTGACCCGT AGCGGCTTACAGAGTTACTTCATCAAACAGAACGATCAACTGGTTGATCTCACGGTGATGGACAGTTGGGTACTTAATCT CACCAAGAACGTCGAATACAGCGAGGCAGACCGCAAAGAGATCCATCGCCAGGTGACCGAACAGTATCTTGGCGATTATA CCGCCACCTGGCGTGCGGCCATGAATAACCTGTCGGTCAGTGATTTTGAAGGCTTGCCACAGGCGATCAGCGCCATTGAA CAGGTGATCAGCGGGGAACAACCTTTCCGCCGTGCACTGCAAACGCTGAGTGACAACACCCGCTTGCCGGTTATCTCGGA TCTGATCCCCGCGAAGGAGCAGCAAGAGCTGCTGCAAAAACCCGATTACCTGCTGCTGACCCGCATCAACCGTGAGTTCT CCCCCGAAACGGCGGTGCTGGTGGAGAATGGCGATAAAGGCAGCGTGATCCAAAGTGTTTACCAAAAACTGACCGAGCTA CACCGCTATCTGTTGGCGATCCAAAACTCGCCCGCGCCGGGCAAAGCGGCGTTGAAGGCGGTGCAATTACGTCTGGATCA AAACAACAGTGATCCGATTTTCGAAGTCCAGCAACTGGCTAAAAACCTGCCGGAGCCGCTAAACCGCTGGGTGGGCGAAC TGGCAGAGCAAGCCTGGCGGGTGGTGATGATGGAGGCTATCCAGTCACTGGAAGTGGAGTGGAATGAGACGGTGATCAAA CAGTATCAAACCTACCTGGCCGGACGTTATCCCTTCGATCCTCACGCGAAACAGGATGTACCACTCAGTGAGTTTGAACG CTTCTTCGGGCCGAAAGGCACGCTCGATGCATTCTATCAGCAGAACCTGAAACCGTTTGTCGAAAACAACCTGACCGGTG GCAGCGATGGCGAATTGCTGATCCGGCCTGATGTGCTACAGCAACTGGCGCAGGCGCGGAAAATTCGCGACACCTTCTTC TCGGCCCAAAACGGCCTGGGCACACAGTTTGCGATTGAACCGGTGCTGTTAAGTGGCAACAAGCGCCGCAGCGTATTGAA TTTGGATGGGCAATTACTGGATTACGCCCATGGTCGCAGCGGCGTAGTGCATCTGGTTTGGCCAAACTCGATGCGTGCAG GAGTGGAAAGCAAACTGACGTTAGTCCCGGATGAGAGCGGCAAATCACCGCGCACCCTCAGCTTCAGCGGCCCTTGGGCG CAATTGCGGCTGATCAACGCCGGTGAACTGACCAATGTGGGCACCAACTCCTTCGATGTCCGCTTCAAGGTTGATGGCGG CGAGATGACGTACCGCATCTTTGTTGATGAATCCGACAACCCATTCGCGGGCGGTTTGTTCAGTAAATTCAGTCTGCCAG ACACTCTGTATTGA Protein sequence : MKLPFFIRIAKPAIPRLKASIPVVLALMACAALIWVWIYGPEWQLGENYPFETLLSRWLVTAVFVLVAVCWLSLKVMRRV QHLEKLQLQTKIQLDDPVSADIEQQNHYLNGWKHQLQRHLNTPEYLYHLPWYMVIGARNSGKSTLIKEGYKLTEISASER LHVEGAADLRVRCWLGEQAVIIDPAGVLIEQPTTPIAGKASLNSRLWQSLLSWLIEQRQRQPLNGIILTVDLHQMMTANK AQRETYVADIHQRLQEIRLSLHSQVPLYVVFTKMDLLYGFEAMYQSLDKAEREAVLGVTFSLNAADPDVWRTELKQFWQQ WVAQLNGAMPDMMLNSVDAGQRSQLFSFTRQMQGLHDYVVQLLEGILYRGEHAQPLLRGVYLTSAQQRGQMDDIFTQSAA VQYHLAPQAFPTWPVSDTTPYFTKALFNQVLLAEPNLAGENGIWLQKTRKRMFIFSGVGALAALTLWGYWHYYHQLNYRA GEEVLTQAKTFLSIPPPEGDDRYGNLQLPLLNPIRDATLAYGNYHERSPFLADMGLYQGNNIGPYVESTYLQLLQQRFVP ALMSGLLEQLNAAPKGSEEKLEILRVMRMLEDGSGRNAALVEQYMSHRWSQQFNGQRELQEQLSSHLNYALKHTDWHGAR ESGDQYAIKSFVPYLSPIQSAQQELSKLSIYQRVYQNLRIKAQDALPPALDLRDQIGASFDDIFVSGNDRLLVIPQFLTR SGLQSYFIKQNDQLVDLTVMDSWVLNLTKNVEYSEADRKEIHRQVTEQYLGDYTATWRAAMNNLSVSDFEGLPQAISAIE QVISGEQPFRRALQTLSDNTRLPVISDLIPAKEQQELLQKPDYLLLTRINREFSPETAVLVENGDKGSVIQSVYQKLTEL HRYLLAIQNSPAPGKAALKAVQLRLDQNNSDPIFEVQQLAKNLPEPLNRWVGELAEQAWRVVMMEAIQSLEVEWNETVIK QYQTYLAGRYPFDPHAKQDVPLSEFERFFGPKGTLDAFYQQNLKPFVENNLTGGSDGELLIRPDVLQQLAQARKIRDTFF SAQNGLGTQFAIEPVLLSGNKRRSVLNLDGQLLDYAHGRSGVVHLVWPNSMRAGVESKLTLVPDESGKSPRTLSFSGPWA QLRLINAGELTNVGTNSFDVRFKVDGGEMTYRIFVDESDNPFAGGLFSKFSLPDTLY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pmt1 | AAN64194.1 | Pmt1 | Not tested | macrophage toxin pathogenicity island | Protein | 0.0 | 69 |
| aec30 | AAQ96724.1 | Aec30 | Not tested | AGI-1 | Protein | 0.0 | 58 |
| aec30 | YP_851415.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 0.0 | 58 |
