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Name : YPK_0389 (YPK_0389) Accession : YP_001719147.1 Strain : Yersinia pseudotuberculosis YPIII Genome accession: NC_010465 Putative virulence/resistance : Virulence Product : type VI secretion protein Function : - COG functional category : S : Function unknown COG ID : COG3519 EC number : - Position : 422127 - 423947 bp Length : 1821 bp Strand : + Note : TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: ypi:YpsIP31758_0316 hypothetical protein DNA sequence : ATGTCGTTCGAAAAGTATTTCAGGGACGAGCTGGACTACCTCCGGCAATTAGGACGCGATGCCGCAATAGAACGGCCTCA TCTCGCTGCATTTTTATCTGAGCAAGGTTCTGATCCGGATGTTGAACGTTTGCTGGAAGGCTTTGCTTTTCTAACGGGCA ACCTGCGTGAAAAAATCGATGATCAATTCCCTGAATTGACTCATGGTTTACTGAATATGTTGTGGCCGAACTACTTACGG CCAATACCGAGCATGACCATCATCGAGTACACACCGGATGAAAGTGTGGTCACCGAGGCGACGCTGGTGAAACGGGGTAG CCAAGTGATGAGTATCCCCATCGCACAAAATGGTCAGCGCAGCGCGTTTATCAACAGTAATGCTCATGCCGGGCCACAAT GTACTTTTACGTTGTGCCGTGATGTGTGGTTGTTCCCCATGTCCATCCGGGAGATCTCGGCGAACAGCAGTAACGAACAA GGCATTTTGAGTGTTCACTTTGCCGCCAAAGCGGAATTGAACTTACAAGACCTGCAACTGGATAAATTGCGCTTTTATCT GGGCGAAGACAACTACACCAGCACGCAACTCTATTTCTGGATTAACCACTATTTCGAACGCGCTGAACTGGTTGTCAACG GGATAACCATCCCGATGCCTGATTTTGACTTTAACCCAGTGGGCTTTGAACGCGATGATGCCCTCTTGCCGTACCCGAAA AACGCCTATATGGGTTACCGGATCCTGCAAGAGTATTTTTGCTTCCCTGAAGGCTTTTTGTTCTTTGATGTCAATGGTGT GGTCGATTTTCCGCCGCACTTGAATGCCAGTGAATTCTCTCTGAATTTGTATTTCTCTCAGGCATTGCCGCCGGACGTGA AAGTCCGCTCCACCACACTGCGGATGAATTGCACACCTGCGGTGAACCTGTTCCAACATGACAGTGAAGCGATTGATCTT GATGGAACCCAGACGGAATATCCGCTCTGTGTCAGCTACCATAATCCGGATCACTACGACATCTTTTCAGTTGATCGGGT TGACAGTTGGCTCAGTGAAAAAGGTGCTCCTAAGGGGCGCGGCCGGGGTCATGGCAGGGTGTACACCTCGTTTGAGAGCT TCCACCATCAGATCGAACACTCGCAAGAAAAGACCGCACTTTATTACCGCCTACGTGTGAAAAATTCATTATTCCGTAAG GGATTCGAACACTACATTTCCTTTGTTCGCAGTGATGAATCGAAGCTGGTGCTTGCTGAAGAGAATGTCTCGGTCAGCCT GACGTGCACCAACCGTGAGTTGCCGCTGTCGTTGCGCGTTGGTGATATCAATCAACTCAGCACAGACAGCCCTTCATTCG CGACGTTCCGCAATATTACCCGTCCTTCCGTGCCGTTGTATCCGGTGCTGGATGGGGGCCTGCATTGGTCATTGCTCTCT AATATGTCGTTGAACTACATGTCCTTACTGGATAAGGACGCGTTGAAGCAAATTCTGCATACCTATGATTTCCCAAGCCT GCATAACCGGCAATCTGCCAGGGCATCGCAAAAGAAACTGGACGCTATCCAACGTATTGAAACACAACCGATTGACCGGT TGTTTCGTGGCTTACCTGTCAGAGGGCTACAAACCACGCTATGGCTGGAGCAAGGGGCCTTTAGCTCTGAAGGCGAGCTT TATCTCTTTAGCACGGTATTAGCTCGCTTCTTCTCACTGTATGCCAGCGTCAATGCGTTTCATCTTTTAAAAGTCATCAA TCTTGATAATCAGGAATGTTACGAATGGCCGGTACAGACAGGTCAACATGCACTGATGTAA Protein sequence : MSFEKYFRDELDYLRQLGRDAAIERPHLAAFLSEQGSDPDVERLLEGFAFLTGNLREKIDDQFPELTHGLLNMLWPNYLR PIPSMTIIEYTPDESVVTEATLVKRGSQVMSIPIAQNGQRSAFINSNAHAGPQCTFTLCRDVWLFPMSIREISANSSNEQ GILSVHFAAKAELNLQDLQLDKLRFYLGEDNYTSTQLYFWINHYFERAELVVNGITIPMPDFDFNPVGFERDDALLPYPK NAYMGYRILQEYFCFPEGFLFFDVNGVVDFPPHLNASEFSLNLYFSQALPPDVKVRSTTLRMNCTPAVNLFQHDSEAIDL DGTQTEYPLCVSYHNPDHYDIFSVDRVDSWLSEKGAPKGRGRGHGRVYTSFESFHHQIEHSQEKTALYYRLRVKNSLFRK GFEHYISFVRSDESKLVLAEENVSVSLTCTNRELPLSLRVGDINQLSTDSPSFATFRNITRPSVPLYPVLDGGLHWSLLS NMSLNYMSLLDKDALKQILHTYDFPSLHNRQSARASQKKLDAIQRIETQPIDRLFRGLPVRGLQTTLWLEQGAFSSEGEL YLFSTVLARFFSLYASVNAFHLLKVINLDNQECYEWPVQTGQHALM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1761 | YP_851424.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 6e-143 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| YPK_0389 | YP_001719147.1 | type VI secretion protein | VFG2078 | Protein | 4e-153 | 50 |
