|
Name : YPK_3916 (YPK_3916) Accession : YP_001722634.1 Strain : Yersinia pseudotuberculosis YPIII Genome accession: NC_010465 Putative virulence/resistance : Virulence Product : YscD/HrpQ family type III secretion apparatus protein Function : - COG functional category : - COG ID : - EC number : - Position : 4312483 - 4313697 bp Length : 1215 bp Strand : - Note : TIGRFAM: type III secretion apparatus protein, YscD/HrpQ family; KEGG: ypi:YpsIP31758_3829 type III secretion apparatus protein, YscD/HrpQ family DNA sequence : ATGACCACCGTATTCAAGCTTCGCCTGTTAAATGGTGATCTCAATGGTCGTGAGCTGATATTACCGGAAGGTGAATTTAC ACTGGGGGAGCAGGGGTGTGATGTTCTGCTGCCTTTATCTGACGGCAATATAGTGACGCTATGTGTTAATGAATATCAGG TAATGATACAGGTGGCGGAGGAGGTTTGGATTAATGGTGCACAGCACGATTTACACACTCCCCTTCCACTGTTGCAATCT ATTGAAATTGCCGGATTGGTATTCGTTCTGGGTGAACAAACGGATATTTTGAGTGGAATTAAAGTCACTCACCGTGCGAG GTTCCCTTTATTGGTATGGCTAGCTATTGCGATATGTGTCCCCTTATCACTGCTGTTTGTTTTTTTATTTTGGTTAACCA CTCAGCCTGAGACATTACGTGCTTCGATTCCTGCGGATGTCCCGACGCAATTAGCCGAACGCCTGCGCGAACCCGCTTTA CAGGGAATAAAGGGAACCTGGCTAGCGGATGGGAGTGTCACATTAAGTGGGCATTGTGCCTCGTCCTCAATGATGGAACC ACTGCAACATTTTTTACTGCGTAACCATATCGCCTTTCGTAACCAATTGGTGTGTGATGATCGCTTAATCGCTTCCGTTA GCGATCTATTACATCAGCATGGTTACCACGATATTGAGGTGCGCATCGGTGATGAACCGGGAAATATTGTGATTTATGGT GCCGTTCAAATGGGTGATCAGTGGTTAACCGTGCAGGACACGCTGGCGGCGGTCTCAGGGTTGAAAGGTTGGCTGGTGGT TAATGCTCATTCAGGGCAAATACAACAACTGGTGGAGCGCTTGAGAGCGGCAGGCTTATTAGGATTCTTAAGCATGACGG AAAGTAATAAAGAGTTGGCCATCAGTGGTGTGCTGTCATCTGAACAGCAGCAGCAGTTAAAGGAGACATTGGCCGCTTTA TCTCAGCAGCAACCCGGTTTTCCGTCAGTCAGGTATCAGAATATTCCGGCGTCAGACCGAACGGATCAATTTCTTCCGGC AAAGGTCGTGAGCTATGGAGGAAATACCCAGTCGGCATTTGTGCGGTTAGCCAATGGTGGGCGTTTGCAGCAAGGGAGTG TGTTGGCAAATGGCTATAAAGTGGTTTTTATTGGGGAACAGGGACTGACGTTATTAAAAGCAAATAATTTAGTACATATC CCCATGGATTTCTAA Protein sequence : MTTVFKLRLLNGDLNGRELILPEGEFTLGEQGCDVLLPLSDGNIVTLCVNEYQVMIQVAEEVWINGAQHDLHTPLPLLQS IEIAGLVFVLGEQTDILSGIKVTHRARFPLLVWLAIAICVPLSLLFVFLFWLTTQPETLRASIPADVPTQLAERLREPAL QGIKGTWLADGSVTLSGHCASSSMMEPLQHFLLRNHIAFRNQLVCDDRLIASVSDLLHQHGYHDIEVRIGDEPGNIVIYG AVQMGDQWLTVQDTLAAVSGLKGWLVVNAHSGQIQQLVERLRAAGLLGFLSMTESNKELAISGVLSSEQQQQLKETLAAL SQQQPGFPSVRYQNIPASDRTDQFLPAKVVSYGGNTQSAFVRLANGGRLQQGSVLANGYKVVFIGEQGLTLLKANNLVHI PMDF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YPO0258 | YP_002345338.1 | type-III secretion protein | Virulence | Not named | Protein | 0.0 | 99 |
