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Name : YPK_0386 (YPK_0386) Accession : YP_001719144.1 Strain : Yersinia pseudotuberculosis YPIII Genome accession: NC_010465 Putative virulence/resistance : Virulence Product : type VI secretion protein Function : - COG functional category : S : Function unknown COG ID : COG3516 EC number : - Position : 419634 - 420131 bp Length : 498 bp Strand : + Note : TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: ypi:YpsIP31758_0313 hypothetical protein DNA sequence : ATGAGTAAAAATAAGCAAAGCAGTGTTGCCCCAAAAGAAAGGATTAACATCAAGTATGTGCCGAATACTGGCGACCAGGT TGCAGAAATTGAATTACCGCTGAATCTGCTGGTTGTGGGTGATCTTAAAGGCGTGCGTGAAGAGACTTCAATTGAAGAGC GTCAGGTTGTTTCGGTCAATAAGAATAACTTCAACTCAGTCATGAACGAAGCAAATATCAGTCTGAGTTTCAATGTGCCT AATCGCCTTGAAGGTGATGGGGAAGAAGACATGCCGGTCGCCTTGTCGATCAAGGGTCTCGATGATTTCTCGCCTGACAA TGTGGCGAAAAAAGTTCCAGAGCTCAAAAAAATTCTGGAACTACGGGAAGCGCTAGTGGCATTGAAAGGGCCATTGGGGA ATATCCCGGCTTTCCGCTCTCGTCTACAGGATTTGCTTGGCAATGAAGATATGCGCGAGCAGTTGCTGAAAGAATTGGAC ATTCTTAATCAAAAATAA Protein sequence : MSKNKQSSVAPKERINIKYVPNTGDQVAEIELPLNLLVVGDLKGVREETSIEERQVVSVNKNNFNSVMNEANISLSFNVP NRLEGDGEEDMPVALSIKGLDDFSPDNVAKKVPELKKILELREALVALKGPLGNIPAFRSRLQDLLGNEDMREQLLKELD ILNQK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec17 | YP_851427.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 7e-37 | 55 |
| aec17 | AAQ96711.1 | Aec17 | Not tested | AGI-1 | Protein | 5e-37 | 55 |
| HH0248 | NP_859779.1 | hypothetical protein | Not tested | HHGI1 | Protein | 3e-26 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| YPK_0386 | YP_001719144.1 | type VI secretion protein | VFG2092 | Protein | 1e-40 | 62 |
| YPK_0386 | YP_001719144.1 | type VI secretion protein | VFG2474 | Protein | 2e-28 | 47 |
