Gene Information

Name : YPK_3565 (YPK_3565)
Accession : YP_001722285.1
Strain : Yersinia pseudotuberculosis YPIII
Genome accession: NC_010465
Putative virulence/resistance : Virulence
Product : type VI secretion protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 3927740 - 3928300 bp
Length : 561 bp
Strand : -
Note : TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: ypi:YpsIP31758_3436 hypothetical protein

DNA sequence :

ATGGCCAAAGATGCGAGCTCGCAAAAATTTATCGGTAGAAATAATGCACCTAGAGTGCAAATTGAATATGACGTCGAAAT
TTATGGTTCAAATAAGAAAGTAGAGTTGCCTTTTGTAACCGGCGTGATGGCTGATCTTTCTGGCCACAGGGCAAAGCCTC
TTCCCGCCGTTGAAGATCGTAAATTCCTTACTTTCGATCAGGATAATTTCGATGCCCGGATGAGAGCAATTAAGCCTCGC
CTTAAATTCTACGTAGATAACACCTTGAGTGAGGATAACGAACTCCTGGATATCGAACTGGATTTTGAGTCAATGGATGA
CTTTTCTCCCGGATCGTTAGCGCGGCGTATTCCTCAAATGGAAAAACTGCTTGAGGCACGTACCCATCTGGCTGAATTGA
TCACCTATATGGATGGTAAAACCAGCGCAGAAGAGGTGGTTAAACAACTGCTTGAACAACCTGATTTTTTACAAAATCTT
GCGACCGATGCACAGGGAACTATTTCGAAGCTCAGCCAGGATGATGATGTTTTAGTGGAAGATGACGATGGAGAAAAATA
G

Protein sequence :

MAKDASSQKFIGRNNAPRVQIEYDVEIYGSNKKVELPFVTGVMADLSGHRAKPLPAVEDRKFLTFDQDNFDARMRAIKPR
LKFYVDNTLSEDNELLDIELDFESMDDFSPGSLARRIPQMEKLLEARTHLAELITYMDGKTSAEEVVKQLLEQPDFLQNL
ATDAQGTISKLSQDDDVLVEDDDGEK

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
STY0297	NP_454879.1	conserved hypothetical protein	Not tested	SPI-6	Protein	9e-47	55

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
YPK_3565	YP_001722285.1	type VI secretion protein	VFG2069	Protein	6e-48	59