Gene Information

Name : YPK_3462 (YPK_3462)
Accession : YP_001722182.1
Strain : Yersinia pseudotuberculosis YPIII
Genome accession: NC_010465
Putative virulence/resistance : Virulence
Product : iron-hydroxamate transporter ATP-binding subunit
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 3802312 - 3803106 bp
Length : 795 bp
Strand : -
Note : part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter

DNA sequence : 
TTGGACCTACAGGCAAGCCACTCCAGCACTTTTATACTCCGTGAACTGAGTTTTTCGGTTCCTGGTCGAACCTTATTACA
GCCGCTGTCACTGACGTTTCCGCAAGGGAAAGTCTGTGGGTTGATCGGCCATAACGGTTCCGGTAAATCGACATTGCTAA
AAATGCTGGGCCGTCATCAACCACCATCAAGTGGTCAGGTTGTGCTCAACGATATGCCACTGGCCCAATGGGATAGCAAA
GCGTTTGCCCGCGAAGTGGCCTATTTACCGCAGCAATTACCGGCCGCAGAAGGGATGACGGTGCGTGAATTAGTCGCCAT
CGGCCGCTATCCGTGGCATGGTGCGCTAGGGCGCTTTCGTCAGGAAGATCGCCAACAAGTCGAAGAGGCGATTGCATTGG
TAGATTTGAAACCACTGGCTAACCGCCTGGTGGACAGCTTGTCTGGCGGTGAGCGGCAGCGGGCTTGGTTGGCGATGATG
GTGGCGCAAAACAGCCGCTGCCTGCTGCTGGATGAGCCTACCTCCGCGCTGGATATTGCTCATCAGGTGGAGGTCTTGGG
GCTAATTCAACGTCTCAGCCACGAGCGTGGCCTAACCGTAATTGCCGTGTTACACGATATCAATATGGCGGCTCGTTATT
GTGACCATCTCGTGGCATTGCGGGGCGGTGAGATGATCGCCCAAGGCCCGGCAGATAGCCTGATGCAGAGTGCGGTGTTA
GAACAAATTTATGGTATCCCAATGGGTATTTTACCGCACCCGGCTGGCGGTGCGCCGGTAAGTTTTGTTTATTAA

Protein sequence : 
MDLQASHSSTFILRELSFSVPGRTLLQPLSLTFPQGKVCGLIGHNGSGKSTLLKMLGRHQPPSSGQVVLNDMPLAQWDSK
AFAREVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFRQEDRQQVEEAIALVDLKPLANRLVDSLSGGERQRAWLAMM
VAQNSRCLLLDEPTSALDIAHQVEVLGLIQRLSHERGLTVIAVLHDINMAARYCDHLVALRGGEMIAQGPADSLMQSAVL
EQIYGIPMGILPHPAGGAPVSFVY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 4e-43 44
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-47 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPK_3462 YP_001722182.1 iron-hydroxamate transporter ATP-binding subunit BAC0164 Protein 2e-43 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPK_3462 YP_001722182.1 iron-hydroxamate transporter ATP-binding subunit VFG1042 Protein 2e-43 44
YPK_3462 YP_001722182.1 iron-hydroxamate transporter ATP-binding subunit VFG0925 Protein 2e-44 44