Gene Information

Name : YPK_3132 (YPK_3132)
Accession : YP_001721856.1
Strain : Yersinia pseudotuberculosis YPIII
Genome accession: NC_010465
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3425755 - 3426084 bp
Length : 330 bp
Strand : -
Note : PFAM: YagBYeeUYfjZ family protein; KEGG: ent:Ent638_0476 YagBYeeUYfjZ family protein

DNA sequence :
ATGTCATTAACACTATCCCATGAATGGGGGCTAAAAAGCGATATCACCCCACGCTTTGGCGCAAGATTGGTGCAGGAAGG
CAATCGCCTGCACTTTCGGGCTGACCATGCGGGTTTTAACGGTGCATTCAGTGAGGATGAGGCGCTGCGGCTTGACCAAG
CGTTTCCACTGATGCTCAAACAGCTTGAACTTAAGCTGCTATCCGGTGAGCTCAATCCTCGTCGTCAGCATTGCGTTACG
TTGAACCACAATGGCCTGACCTGCGAAGCTGACACCCTCGGCTCTCACGGGTATGTCTATATCACTATTTACCCGGCAAG
CCCGGAATAA

Protein sequence :
MSLTLSHEWGLKSDITPRFGARLVQEGNRLHFRADHAGFNGAFSEDEALRLDQAFPLMLKQLELKLLSGELNPRRQHCVT
LNHNGLTCEADTLGSHGYVYITIYPASPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yeeU ADD91700.1 YeeU Not tested PAI-I AL862 Protein 1e-20 69
ECO103_3591 YP_003223448.1 hypothetical protein Not tested LEE Protein 6e-21 69
yeeU CAD42100.1 hypothetical protein Not tested PAI II 536 Protein 9e-21 68
aec75 AAW51758.1 Aec75 Not tested AGI-3 Protein 4e-21 68
unnamed CAD66206.1 hypothetical protein Not tested PAI III 536 Protein 2e-21 68
Z1220 NP_286755.1 structural protein Not tested TAI Protein 5e-21 68
Z1658 NP_287161.1 structural protein Not tested TAI Protein 5e-21 68
yeeU YP_853121.1 antitoxin of the YeeV-YeeU toxin-antitoxin system Virulence PAI IV APEC-O1 Protein 8e-21 67
yeeU NP_838486.1 structural protein Not tested SHI-1 Protein 3e-21 67
yeeU NP_708772.1 structural protein Not tested SHI-1 Protein 3e-21 67
unnamed AAK00481.1 unknown Not tested SHI-1 Protein 2e-21 67
unnamed AAL08477.1 unknown Not tested SRL Protein 1e-19 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPK_3132 YP_001721856.1 hypothetical protein VFG1681 Protein 8e-22 68
YPK_3132 YP_001721856.1 hypothetical protein VFG1619 Protein 4e-21 68
YPK_3132 YP_001721856.1 hypothetical protein VFG0662 Protein 8e-22 67
YPK_3132 YP_001721856.1 hypothetical protein VFG1068 Protein 4e-20 64