Gene Information

Name : YPK_3129 (YPK_3129)
Accession : YP_001721853.1
Strain : Yersinia pseudotuberculosis YPIII
Genome accession: NC_010465
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3423793 - 3424641 bp
Length : 849 bp
Strand : -
Note : KEGG: ent:Ent638_0478 hypothetical protein

DNA sequence :
ATGTCTGAGATACAAGTCAATAACGACTCCGACGTAATAACCGGTCATACCGAAATCATCAGTTCCACCAGCATTGAACG
TATCGTGACAGGCCGCAATGCGGCACTGCTACAGATTGAAGAACTCATCCAGCAACTTGCCGACATTTCGACGCTGACCA
GTAGTATCGGTGGAAAAACGGCCCGTGACTGGGCGATGCGTCAGGACTTTCGTTGTGGCTGCTGGCTCATGGAAAACGTG
AAAACTGCAATGAGTACCATTACCTGTAATCTTGATCGCAGCATCTGGCGTGATCTGATGAAAAAATCAGGGATGATCTC
GTTGATGGACGCTCAGGCGCGTAAGCAATGGGATAATAATCTCGAGGGTGACGATATTCCTGAGATCAGCGAAGCTAACA
TTCTTAGCACCTTTGAGCAATTGCATCACAGTAAAGCTGATGTGTTTGAACGGGGCATCATTAATGTGTTCAAAGGTTTG
TCATGGGATTACAAAACGAACTCCCCTTGCCAGTTCGGCAAAAAGATTATTGTAAATGGCCTAGTGGATCACAACCGCTG
GGGATTTAAGCTCAACTGGGGATGGCGTCGGGAACAACTGGCTGACCTGGAACGTATGTTGTTTTTACTCGATGGCAAAC
CGATTCCCGACAACCGTGGTGATATCTCTAACCGATTGATGGAACATATTCGGGATAACCCGGCTAAGGATGTTTACGAG
GATGAGTTCTTCAGTATTCGTTACTTTCAGAAGGGTACTGCGCATCTCACCTTCAAGCGCCCCGAGTTAGTTGAGAAGAT
GAACGACATCATTTCTAAGTATTATCCTAGGATGTTGGCGTCCAGATAG

Protein sequence :
MSEIQVNNDSDVITGHTEIISSTSIERIVTGRNAALLQIEELIQQLADISTLTSSIGGKTARDWAMRQDFRCGCWLMENV
KTAMSTITCNLDRSIWRDLMKKSGMISLMDAQARKQWDNNLEGDDIPEISEANILSTFEQLHHSKADVFERGIINVFKGL
SWDYKTNSPCQFGKKIIVNGLVDHNRWGFKLNWGWRREQLADLERMLFLLDGKPIPDNRGDISNRLMEHIRDNPAKDVYE
DEFFSIRYFQKGTAHLTFKRPELVEKMNDIISKYYPRMLASR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec79 AAW51762.1 Aec79 Not tested AGI-3 Protein 4e-80 65
ORF_49 AAZ04463.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-80 65
Z1664 NP_287166.1 hypothetical protein Not tested TAI Protein 2e-80 65
z1226 CAD33792.1 Z1226 protein Not tested PAI I 536 Protein 5e-78 65
APECO1_3484 YP_854327.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-80 65
Z1226 NP_286760.1 hypothetical protein Not tested TAI Protein 2e-80 65
unnamed AAL57572.1 unknown Not tested LEE Protein 3e-77 64
unnamed CAI43906.1 hypothetical protein Not tested LEE Protein 7e-77 64
S3207 NP_838489.1 hypothetical protein Not tested SHI-1 Protein 5e-77 63
unnamed AAK00485.1 unknown Not tested SHI-1 Protein 4e-77 63
SF3002 NP_708776.1 hypothetical protein Not tested SHI-1 Protein 5e-77 63
unnamed CAE85207.1 hypothetical protein Not tested PAI V 536 Protein 2e-77 63
ECO103_3595 YP_003223452.1 hypothetical protein Not tested LEE Protein 2e-77 62
ECO111_3781 YP_003236116.1 hypothetical protein Not tested LEE Protein 4e-78 62
unnamed CAD66210.1 hypothetical protein Not tested PAI III 536 Protein 2e-71 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPK_3129 YP_001721853.1 hypothetical protein VFG1533 Protein 3e-78 65
YPK_3129 YP_001721853.1 hypothetical protein VFG0666 Protein 2e-77 63
YPK_3129 YP_001721853.1 hypothetical protein VFG1685 Protein 1e-71 61