Gene Information

Name : YPK_2758 (YPK_2758)
Accession : YP_001721488.1
Strain : Yersinia pseudotuberculosis YPIII
Genome accession: NC_010465
Putative virulence/resistance : Virulence
Product : pili assembly chaperone
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 3043481 - 3044302 bp
Length : 822 bp
Strand : -
Note : PFAM: pili assembly chaperone; KEGG: ypi:YpsIP31758_2677 gram-negative pili assembly chaperone

DNA sequence :
ATGAAGAATCTATTTTTTTCTGCATATAAAAAAGTATTTTCTTATATCACATCAATAGTCATATTCATGGTGTCTTTACC
TTATGCTTATTCTCAAGATGTTGTTGTCAATACGACTAAGCATCTTTTTACTGTAAAAATAGGGACGACGCGGGTCATTT
ACCCTTCGTCTTCGACAAAAGGGGTATCCGTATCGGTGGCTAATCCACAGGATTATCCAATATTGGTACAAACCCAAGTT
AAAGATGAAGATAAGACGTCGCCCGCTCCTTTTATTGTTACCCCTCCTTTATTCAGGCTTGATGCTGGGTTACAAGGCCG
TGTACGTATTATTCGGACCGGTGGAAAATTCCCTGAAGATCGTGAAACACTGCAATGGTTGTGCCTAACGGGGATCCCAC
CTAAGAACGGTGATGCTTGGGGTAATACGCAAAATAATCCAAAAAATTCATCCCCAACTATGGATATTCAAATGTCTATC
AGTACCTGCATAAAATTATTATTCAGACCCGATAAAGTTAAAGGAGATCCGACGGATAGTGCGGATTCATTAACTTGGAG
ATATAAAGGTAACTACTTGGAAGTTAATAATCCAACGCCATTCTACATGAATTTTTATTCACTCCGTATTGGTGATGAAA
AAATAAATTTATCTGATTTAGGTTCAAAGGATGAAATAAAAAATGGCAGCTATGTTCCGCCATTCTCTTCTAGGGATTTT
ATTATTCCGGTAAAAAATAAAGGTAAGGCAACAGAGGTTTTTTGGCAAGTGATTAATGATAATGGTGGTGTGAGCCGGGA
ATTTAAAAGCACAGTCCAGTAA

Protein sequence :
MKNLFFSAYKKVFSYITSIVIFMVSLPYAYSQDVVVNTTKHLFTVKIGTTRVIYPSSSTKGVSVSVANPQDYPILVQTQV
KDEDKTSPAPFIVTPPLFRLDAGLQGRVRIIRTGGKFPEDRETLQWLCLTGIPPKNGDAWGNTQNNPKNSSPTMDIQMSI
STCIKLLFRPDKVKGDPTDSADSLTWRYKGNYLEVNNPTPFYMNFYSLRIGDEKINLSDLGSKDEIKNGSYVPPFSSRDF
IIPVKNKGKATEVFWQVINDNGGVSREFKSTVQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
safB NP_454906.1 periplasmic fimbrial chaperone protein Not tested SPI-6 Protein 5e-49 43
afaB AAK16197.1 AfaB Virulence PAI-I AL862 Protein 2e-47 42
afaB ADD91742.1 putative AfaB-VIII periplasmic chaperone Not tested PAI-I AL862 Protein 2e-47 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPK_2758 YP_001721488.1 pili assembly chaperone VFG0858 Protein 3e-47 46
YPK_2758 YP_001721488.1 pili assembly chaperone VFG0943 Protein 1e-48 46
YPK_2758 YP_001721488.1 pili assembly chaperone VFG0850 Protein 9e-50 42
YPK_2758 YP_001721488.1 pili assembly chaperone VFG0852 Protein 2e-48 41
YPK_2758 YP_001721488.1 pili assembly chaperone VFG0420 Protein 3e-44 41