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Name : YPK_2352 (YPK_2352) Accession : YP_001721082.1 Strain : Yersinia pseudotuberculosis YPIII Genome accession: NC_010465 Putative virulence/resistance : Unknown Product : late control D family protein Function : - COG functional category : R : General function prediction only COG ID : COG3500 EC number : - Position : 2585468 - 2586562 bp Length : 1095 bp Strand : + Note : PFAM: late control D family protein; KEGG: yps:YPTB1835 bacteriophage P2 gpD protein DNA sequence : ATGATAAGCATTGATACCGGGCATAACGAACCCGATTATTCTATTTCCGTGGATGGCATAGATAAAACGGGTGGCATTAA AAAGCGCCTAATGTCATTGACGTTAACTGATAACCGGGGCTTTGAAGCCGATCAATTAGATATTGAGTTTGATGACGCGG ACGGTAAAGTAGAGTTACCCCGTCGTGGCGCTAAAATAGCGGTATCACTCGGCTGGAAAGGCGCAGCGCTGATCGATAAA GGTACATTCACCGTAGATGAAATAGAGCATAGCGGCGCACCGGATAAGCTGACGATTCGCGCCCGCAGTGCGGATTTTCG TGAAACGCTTAATATTCGCCGTGATCACTCTTACCATAAGACCACGATTGGCGGGATAATTAAAACCGTTGCCGAGCGAA ATAAACTCACGCCAACATTAAATAAAGCGATGTCTGATTTAGCTGTTGACCATATAGACCAAACCAACGAATCAGACGGT AATTTCATTACCCGACTGGCGAAACAATATGGCGCTATTGCCGCTGTGAAAAATGGCAATTTGTTATTTATTCGTCAGGG CCAGTCGAAAACTGCCAGCGGTAAACCGATCCCGATGATGACCATTATCCGCAGCTTGGGCGACGGCCATCAGTTTAGTA TGGCTGACCGGGGCGCTTATACCGGTGTGGTAGCGAACTGGCTCAACACCCGCACCACTGAAAAACCCGTGGTTAAGGTA AAGCGAAAACGCAAACGTAAGGCGACCACTACCGCCAAGCCCAAAGAGCCAGAAGAGAAACAGGGTGAATATCTGATCGG TACTGATGAGAATGTGCTGACCTTACGCACCACTTACGCCAGTAAAAACAATGCACAGCGAGCGGCTAAATCGAATTGGG AACGGCTGCAACGGGGCGCGGCGAAATTCTCTATTCAGCTTGCAAAGGGGCGCGCAGATCTCTATCCAGAAGTGCCGGTT AAAGTTACTGGATTCAAAAAACAGATTGATGAAGCAGATTGGACGCTGGTCACGGTGACCCATTCCGTGAGTGACAGCGG TTTTACTACCGCGCTGGAATTAGAAGTGAAAATAGATGATTTGGATATGGAATGA Protein sequence : MISIDTGHNEPDYSISVDGIDKTGGIKKRLMSLTLTDNRGFEADQLDIEFDDADGKVELPRRGAKIAVSLGWKGAALIDK GTFTVDEIEHSGAPDKLTIRARSADFRETLNIRRDHSYHKTTIGGIIKTVAERNKLTPTLNKAMSDLAVDHIDQTNESDG NFITRLAKQYGAIAAVKNGNLLFIRQGQSKTASGKPIPMMTIIRSLGDGHQFSMADRGAYTGVVANWLNTRTTEKPVVKV KRKRKRKATTTAKPKEPEEKQGEYLIGTDENVLTLRTTYASKNNAQRAAKSNWERLQRGAAKFSIQLAKGRADLYPEVPV KVTGFKKQIDEADWTLVTVTHSVSDSGFTTALELEVKIDDLDME |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4601 | NP_458684.1 | putative regulator of late gene expression | Not tested | SPI-7 | Protein | 4e-108 | 66 |
| t4295 | NP_807892.1 | regulator of late gene expression | Not tested | SPI-7 | Protein | 4e-108 | 66 |
| unnamed | ABR13490.1 | phage late control D | Not tested | PAGI-6 | Protein | 6e-53 | 41 |
