|
Name : YPK_2329 (YPK_2329) Accession : YP_001721059.1 Strain : Yersinia pseudotuberculosis YPIII Genome accession: NC_010465 Putative virulence/resistance : Unknown Product : P2 family phage major capsid protein Function : - COG functional category : - COG ID : - EC number : - Position : 2569052 - 2570107 bp Length : 1056 bp Strand : + Note : TIGRFAM: phage major capsid protein, P2 family; PFAM: major capsid protein P2; KEGG: yps:YPTB1857 putative major capsid protein DNA sequence : ATGAAAAAAACCACCCGATTTCAGTACAACCAGTTTTTGCAGCAGGTCGCCCGGCTGAACCATTTGGACAATAAAGACGA CATTGCCGCGAAATTCACCGTTGAACCATCGATTGCGCAAAAACTGGAAACCAAACAGCAAGAAAGCAGCGCCTTTCTGT TAAAAATCAACATGTATCCAGTGGATGAAAAAGAGGGTGAAAAAGTTGGTTTAAGTATTGACCGCCCGATTGCCAGCACC ACAGATACCACGCAGAAAGAACGTGAAGCATCAGACCCTAGCGGTCTGGATGGGACAAAATACAACTGTACCCAGACTAA CTTTGATACCGCGCTGCCTTATATCAAATTGGATATGTGGGCTAAATTCCCTGATTTTCAAACTCGCATCCGTGATGCCA TTGTGAAACGCCAGGCACTGGATCGCATCATGATCGGCTTTAACGGTATCAAGCGGGTGAAAACCTCTGATCATACCGTT AATAAGCTATTGCAAGATGTCAACCGGGGCTGGCTGCAAAGCATTCGTGATGATGCGCCGGGCCAGATGATGGATAAGAT TGTTGATGATAAAGGCGATGTTATCTCGCCTAAAATCCGCATCGGCAAAGGCGGGGATTTCAATAATCTGGATGCGCTGG TGATGGCGGCAACCGATGAACTGATCGAGCCGTGGTTCCAGGAAGATACCGAGCTTGTCGCGATTACCGGCCGCCAGTTA CTGGCGGATAAATATTTTCCTATCGTCAACCAATCACAGCCGAACACAGAAGCGCTGGCCGCTGACTTGATTATCAGTCA GAAGCGTATCGGTGGTCTGCCCGCAGTACGTGCGCCGTCTTTCCCGCCTGATGCCATTTTTATCACCCGGCTAGATAACC TGTCTATTTACTGGCAGGACGGCACCCGCAGGCGCTCAATCATCGACAACCCACGCCGTGACCGTATTGAAAACTTTGAA TCGGTTAACGAGGCCTACGTGGTTGAAGATTTTGGCTGTGTGGCCCTGATTGAAAACATTGAGTTCGGTGATTTTTCCGT CCCAGCAGAGGGTTAA Protein sequence : MKKTTRFQYNQFLQQVARLNHLDNKDDIAAKFTVEPSIAQKLETKQQESSAFLLKINMYPVDEKEGEKVGLSIDRPIAST TDTTQKEREASDPSGLDGTKYNCTQTNFDTALPYIKLDMWAKFPDFQTRIRDAIVKRQALDRIMIGFNGIKRVKTSDHTV NKLLQDVNRGWLQSIRDDAPGQMMDKIVDDKGDVISPKIRIGKGGDFNNLDALVMAATDELIEPWFQEDTELVAITGRQL LADKYFPIVNQSQPNTEALAADLIISQKRIGGLPAVRAPSFPPDAIFITRLDNLSIYWQDGTRRRSIIDNPRRDRIENFE SVNEAYVVEDFGCVALIENIEFGDFSVPAEG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4625 | NP_458707.1 | putative major capsid protein | Not tested | SPI-7 | Protein | 2e-108 | 63 |
| t4319 | NP_807914.1 | major capsid protein | Not tested | SPI-7 | Protein | 2e-108 | 63 |
| unnamed | ABR13466.1 | predicted major capsid protein | Not tested | PAGI-6 | Protein | 2e-79 | 51 |
