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Name : YPK_2328 (YPK_2328) Accession : YP_001721058.1 Strain : Yersinia pseudotuberculosis YPIII Genome accession: NC_010465 Putative virulence/resistance : Unknown Product : capsid scaffolding Function : - COG functional category : - COG ID : - EC number : - Position : 2568200 - 2569015 bp Length : 816 bp Strand : + Note : PFAM: capsid scaffolding; KEGG: yps:YPTB1858 similar to V protein phage 186 DNA sequence : ATGACCGTAAAAGCAAAAAAATTCCGCATTGGCGTAGAGGGTGCCACCACTGATGGCCGCACCATCACCCGCGAATGGCT AACGCAAATGGCCGATAGCTACAACACCACGGTATACGGTGCCCGAATCAATATGGAGCACATCAAAGGCTATTCACCAG ACAGCACCTTTAAACGCTATGGTGATGTGACGGGCCTGAGTGCCGAAGAAATCAAGGACGGGCCGTTATCGGGGAAAATG GCACTGTATGCCGAAATCAGCCCTACAGCCGATTTGGTAGAAATGGTGAAGGATCGCCAAAAGGTTTACACCTCAATGGA AGTAAATATTAAATTTGCCGACACCAACAGTGCCTATCTTGTTGGCCTTGCGGTCACTGATGATCCCGCCAGTCTGGGTA CTGAAATGTTGAATTTCAGCGCCAGCGCCTCCGCTAATCCGCTGGCCTCCCGTAAGCAAGCCCCTGAGAACCTGTTTACC GCCGCAGAAGAAACGCTGATTGAATTCGAAACCGAGCAAGAACCTAAAACCAACCTGCTTACCACCATTAAAACCCTGTT TACCAAAAAGCAAACCGGTGATGACGCACGTTTTAACGATGTGCATCAGGCGGTTGAGTTGGTGGCGCAGCAGGTTGAGG GGAAATTTAGCGCCCTTACCGCGCTGGAACAGCGGTTTTCTGAGCTAAAAACCGCCAATGGTGCGACCCAGCAAGCGCTT GATGAGCTGAAAACCACGCTCAGTAAAACAGATGGCAATTTCTCCCAACGCGAAAAATCAACCGGCAATGACAGCGCCAT TCTGACTGATTGCTAA Protein sequence : MTVKAKKFRIGVEGATTDGRTITREWLTQMADSYNTTVYGARINMEHIKGYSPDSTFKRYGDVTGLSAEEIKDGPLSGKM ALYAEISPTADLVEMVKDRQKVYTSMEVNIKFADTNSAYLVGLAVTDDPASLGTEMLNFSASASANPLASRKQAPENLFT AAEETLIEFETEQEPKTNLLTTIKTLFTKKQTGDDARFNDVHQAVELVAQQVEGKFSALTALEQRFSELKTANGATQQAL DELKTTLSKTDGNFSQREKSTGNDSAILTDC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4626 | NP_458708.1 | putative capsid protein | Not tested | SPI-7 | Protein | 2e-64 | 61 |
| t4320 | NP_807915.1 | capsid protein | Not tested | SPI-7 | Protein | 2e-64 | 61 |
| unnamed | ABR13465.1 | putative capsid scaffold | Not tested | PAGI-6 | Protein | 2e-38 | 47 |
