Gene Information

Name : YPK_2305 (YPK_2305)
Accession : YP_001721035.1
Strain : Yersinia pseudotuberculosis YPIII
Genome accession: NC_010465
Putative virulence/resistance : Unknown
Product : late control D family protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3500
EC number : -
Position : 2551372 - 2552466 bp
Length : 1095 bp
Strand : +
Note : PFAM: late control D family protein; KEGG: yps:YPTB1835 bacteriophage P2 gpD protein

DNA sequence :
ATGATAAGCATTGATACCGGGCATAACGAACCCGATTATTCTATTTCCGTGGATGGCATAGATAAAACGGGTGGCATTAA
AAAGCGCCTAATGTCATTGACGTTAACTGATAACCGGGGCTTTGAAGCCGATCAATTAGATATTGAGTTTGATGACGCGG
ACGGTAAAGTAGAGTTACCCCGCCGTGGCGCTAAAATAGCGGTATCACTCGGCTGGAAAGGCGCAGCGCTGATCGATAAA
GGTACATTTACCGTAGATGAAATAGAACACAGTGGCGCGCCGGATAAGCTGACTGTTCGCGCGCGCAGTGCGGATTTTCG
TGAAACGCTCAATATTCGCCGTGATCAGTCTTACCATAAGACCACTATTGGCGGGATAATTAAAACCGTTGCCGAGCGGA
ATAAACTCGCCCCAACATTAAATAAAACCATGTCTGATTTGACCATTGACCATATAGACCAAACCAACGAATCAGACGGT
AATTTTATTACCCGACTGGCGAAACAATATGGCGCTATTGCCGCTGTGAAAAATGGCAATCTGTTATTTATTCGTCAGGG
CCAAGCTAAAACCGCCAGCGGTAAACCCATTCCGGCCATGACTATTATTCGTGGTCTGGGCGACGGCCATCAGTTTAGTA
TGGCTGACCGGGGCGCTTATACCGGCGTTGTCGCCAACTGGCTGAATACTCGCACCACTGAAAAGCCAGTGGTTAAGGTC
AAGCGAAAACGCAAACGTAAGGCGACCACTGCCGCCAAGCCCAAAGAGCCCGAAGAGAAACAGGGCGAATATCTGATCGG
TACTGATGAGAATGTGCTGATCTTACGCACCACTTACGCCAGTAAAAACAATGCACAGCGGGCGGCAAAATCAAACTGGG
AACGGATACAGCGAGGGGTGGCTAAGTTTTCTATCCAGCTTGCTAAAGGCCGCGCAGATCTCTATCCCGAGGTGCCGGTT
AAAGTGTTCGGGTTTAAAAAACAGATTGATGAAGCTGACTGGACATTGCTTACGGTTACTCACTCATTGAGTGATGACGG
CTTTACTACCGCACTGGAATTAGAGGTGAAAATAGATGATTTGGATATGGAATGA

Protein sequence :
MISIDTGHNEPDYSISVDGIDKTGGIKKRLMSLTLTDNRGFEADQLDIEFDDADGKVELPRRGAKIAVSLGWKGAALIDK
GTFTVDEIEHSGAPDKLTVRARSADFRETLNIRRDQSYHKTTIGGIIKTVAERNKLAPTLNKTMSDLTIDHIDQTNESDG
NFITRLAKQYGAIAAVKNGNLLFIRQGQAKTASGKPIPAMTIIRGLGDGHQFSMADRGAYTGVVANWLNTRTTEKPVVKV
KRKRKRKATTAAKPKEPEEKQGEYLIGTDENVLILRTTYASKNNAQRAAKSNWERIQRGVAKFSIQLAKGRADLYPEVPV
KVFGFKKQIDEADWTLLTVTHSLSDDGFTTALELEVKIDDLDME

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4601 NP_458684.1 putative regulator of late gene expression Not tested SPI-7 Protein 1e-106 65
t4295 NP_807892.1 regulator of late gene expression Not tested SPI-7 Protein 1e-106 65
unnamed ABR13490.1 phage late control D Not tested PAGI-6 Protein 6e-51 41