Gene Information

Name : YPK_2192 (YPK_2192)
Accession : YP_001720928.1
Strain : Yersinia pseudotuberculosis YPIII
Genome accession: NC_010465
Putative virulence/resistance : Virulence
Product : two component heavy metal response transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2429976 - 2430668 bp
Length : 693 bp
Strand : +
Note : TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ypm:YP_1848 transcriptional activator

DNA sequence : 
ATGCGGCTATTGTTGGTAGAAGATGAGGAGAAGACATCTTCGTATATCAATCGCGCCCTCAGCGAGTTGGGCTTTACCGT
CGATGTAGCGGCCACCGGGATCGACGGATTATATCTGGCTCTTGAGTATGATTACGATACGATTGTGCTCGATGTCATGT
TGCCCGGCATGGATGGTTACAGCGTTCTCGAAGGCCTACGCGCCAGCAAACAAACTCCGGTTCTGATGTTATCCGCCCGT
GGCTCGGTTGATGAACGAGTTAAGGGCCTGCGTCACGGTGCCGACGATTATTTGCCTAAGCCTTTTTCGCTGATTGAACT
GGTTGCGCGTATCCAGGCCTTGTTGAGGCGGCGTCCCAGTGATGGTGTAGATGTCAGCCAATTGCACATTAATGATCTAC
ATCTCGACCTGCTGGCAAGGCGTGTCACGCGAGCCGGTGAACGTCTTGAACTCACCGCCAAAGAGTTCGCCCTGTTAAGC
CTGTTAGCCAGACATCAGGGGGAAATTCTGTCAAAAATGATGATTGCAGAGCAGGTCTGGGACATGAATTTTGACAGCGA
TGCTAATGTCGTTGAGGTGGCGATAAAACGCCTGCGGGCGAAAATAGATACGCCCTACCCGGTCAAACTGCTGCATACAG
TGCGAGGCATGGGGTATGTCCTTGAAACTCGCCCCGATCGCCAGACTAAATAG

Protein sequence : 
MRLLLVEDEEKTSSYINRALSELGFTVDVAATGIDGLYLALEYDYDTIVLDVMLPGMDGYSVLEGLRASKQTPVLMLSAR
GSVDERVKGLRHGADDYLPKPFSLIELVARIQALLRRRPSDGVDVSQLHINDLHLDLLARRVTRAGERLELTAKEFALLS
LLARHQGEILSKMMIAEQVWDMNFDSDANVVEVAIKRLRAKIDTPYPVKLLHTVRGMGYVLETRPDRQTK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 8e-54 50
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-52 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPK_2192 YP_001720928.1 two component heavy metal response transcriptional regulator BAC0083 Protein 2e-62 61
YPK_2192 YP_001720928.1 two component heavy metal response transcriptional regulator BAC0197 Protein 4e-60 58
YPK_2192 YP_001720928.1 two component heavy metal response transcriptional regulator BAC0638 Protein 7e-53 57
YPK_2192 YP_001720928.1 two component heavy metal response transcriptional regulator BAC0125 Protein 8e-61 56
YPK_2192 YP_001720928.1 two component heavy metal response transcriptional regulator BAC0111 Protein 1e-59 53
YPK_2192 YP_001720928.1 two component heavy metal response transcriptional regulator BAC0347 Protein 1e-52 51
YPK_2192 YP_001720928.1 two component heavy metal response transcriptional regulator BAC0308 Protein 3e-52 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPK_2192 YP_001720928.1 two component heavy metal response transcriptional regulator VFG0596 Protein 3e-54 50
YPK_2192 YP_001720928.1 two component heavy metal response transcriptional regulator VFG1389 Protein 2e-38 48
YPK_2192 YP_001720928.1 two component heavy metal response transcriptional regulator VFG1390 Protein 3e-40 44
YPK_2192 YP_001720928.1 two component heavy metal response transcriptional regulator VFG1386 Protein 5e-35 43