Gene Information

Name : Daud_0009 (Daud_0009)
Accession : YP_001716210.1
Strain : Candidatus Desulforudis audaxviator MP104C
Genome accession: NC_010424
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 10065 - 10949 bp
Length : 885 bp
Strand : +
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGGTTGAGAAAGGTACTTGGACTGTCAAAAAGGGCCTGGCGGAGATGCTCAAGGGGGGCGTCATCATGGACGTCACCAC
TCCGGAGCAGGCCCGGATTGCCGAGGCGGCCGGAGCATGCGCGGTTATGGCCCTGGAGCGGGTGCCGGCCGATATCCGGG
CAGCCGGCGGCATCGCCCGCATGGCGGACCCCACCGTGATCCAGAGAATCATGGAGGCCGTGACTATTCCGGTCATGGCC
AAGGTGCGGATCGGTCACTTCGTGGAGGCCCAGATTCTCGAAGCCATGGGCGTAGATTATATCGACGAGAGCGAGGTTCT
GACGCCAGCGGACGAGCAATACCACATCAACAAACATCCCTTCAAAGTGCCTTTTGTTTGCGGCTGCCGTAATCTGGGCG
AGGCCTTGCGGCGCATCGCCGAGGGGGCGGCTATGATCCGGACCAAAGGTGAGCCCGGGACCGGGAACGTGGTGGAGGCC
GTACGGCACATGCGGATGGTGACGGATGAAATCCGCCGGGTGCAGTCGGCGCCACGGGAGGAGCTGGTGGCCATCGCCCG
TGAACTGGGGGCACCGTACGAACTGGTGCTCCAGGTGGCCGAACTGGGTCGGCTCCCGGTGGTCAACTTCGCCGCCGGCG
GGATCGCCACCCCCGCCGACGCCGCCCTGATGATGCAGTTGGGGTGCGACGGGATCTTCGTCGGGTCCGGGATTTTCAAA
TCATCCAACCCCGAGGCCCGCGCCCGGGCGATCGTGGCGGCGACCACCCACTACAACGACCCTCAGATCCTGGCCGACAT
TTCCCGGGACCTGGGCGAGGCCATGAAGGGTCTTGAAATCAGTACCATTCCGGAGCACGAGCGGATGCAGGAGCGCGGCT
GGTAA

Protein sequence :
MVEKGTWTVKKGLAEMLKGGVIMDVTTPEQARIAEAAGACAVMALERVPADIRAAGGIARMADPTVIQRIMEAVTIPVMA
KVRIGHFVEAQILEAMGVDYIDESEVLTPADEQYHINKHPFKVPFVCGCRNLGEALRRIAEGAAMIRTKGEPGTGNVVEA
VRHMRMVTDEIRRVQSAPREELVAIARELGAPYELVLQVAELGRLPVVNFAAGGIATPADAALMMQLGCDGIFVGSGIFK
SSNPEARARAIVAATTHYNDPQILADISRDLGEAMKGLEISTIPEHERMQERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 4e-87 68
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 5e-87 68
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 4e-87 68