Gene Information

Name : Daud_0452 (Daud_0452)
Accession : YP_001716630.1
Strain : Candidatus Desulforudis audaxviator MP104C
Genome accession: NC_010424
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 490597 - 493185 bp
Length : 2589 bp
Strand : -
Note : PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: ade:Adeh_0385 AAA ATPase, ClpA/B

DNA sequence :
ATGATGCGGTTGGATAAACTGACCATCCGGGCCCAGGAAGCGTTTGAGGCCGCTAGGGCCGCGGCCGAACAGTACAATCA
CCAGGCGATCGACTCGGAACACCTGCTGGCCGGCCTGCTGCAACCGGAACAGAGTACGGTGCACCTGATTCTGGGCCGCC
TCGAGGTCACTCCGGCCGCACTCCTGGAGCGCCTCCGGGAGGAACTGAAGCGCAAGCCCCGGGTGTCCGGCGCCGGCACC
GGGCAGGTATACGTCACGCCCAACGTACAGAAGGTGCTGGAGCAGGCCTGGGCGGAAGCCGGCAAGCTCAAGGACGAGTT
TTTGAGCACCGAGCACCTTTTGCTGGCCCTGGCCGGCCCCGACGGCGGCAACGCGGGTGGGCTCCTGAAACAGCACGGCG
TGACGCCCGACCGGATCCTCCAGGCACTGAAGGAGGTTCGGGGCACGCAGCGGGTGACCGACCCCAACCCGGAGGACAAA
TATCGGGCGCTGGACCGGTTCACCCAGGACCTAACCAAGCTCGCCGCCCAGAACAAACTGGACCCGGTCATCGGCCGGGA
CGACGAAATCCGGCGGGTGATGCAGGTCCTGTCGCGGCGCACCAAGAACAACCCGGTGCTCATCGGCGAGCCCGGCGTGG
GCAAGACGGCGATCGCCGAGGGACTCGCCCGGCGAATCAACGCCGGGGACGTTCCCGAAACTCTGAAAAACAAGCGCCTG
CTCGCCTTCGATATCGGCGCGCTGGTGGCCGGGGCGAAATACCGGGGCGAATTCGAGGACCGGCTGAAGGCGGTGCTCAA
GGAGATCACCGAGAGCCACGGTGAAATCATCCTGTTCATTGACGAACTGCACACCCTGGTCGGGGCCGGCAAGGCCGAAG
GAGCGATCGACGCCGCCAACATGCTGAAGCCCGCCCTGGCCCGGGGTGAGCTGCGGTGCATCGGGGCCACCACTCTGGAC
GAGTACCGGAAGCACATCGAGAAGGACCCGGCGCTGGAACGGCGCTTCCAGCCGGTGTACGTCGGAGAGCCCGACGCGGC
CGACACGATCGCCATCCTGCGCGGGTTGAAGGAACGGTACGAAGTGCACCACGGGGTGCGCATCAAGGACTCCGCCCTGG
TGGCGGCCGCCACCCTGTCGGACCGGTACATCACCGAGCGGTTCCTGCCCGACAAGGCGATCGACCTCATTGACGAGGCG
GCCGCCAAGCTCCGGACGGAACTCGACTCGCGGCCGGCGGAGATCGACGAGGTGGACCGGCGCGTACGCCAGTTGGAAGT
GGAGCGCCAGGCCCTCCTCAAGGAGGAGGACGAAGCCAGCCGGGAAAGGCTGGCCCGACTCGAAGAGGAAAAGGCACGCG
CCGAAGAGCGGCTGGCGAAGCTCCAGGCGTTGTGGGACGAGGAAAAGAACTTGATCCAGCAGGGCCGGCTGCTCAAGGAG
CGGATCGAGGACGCCCGGACCGAGGACGAGGCGGCCGAGCGGAACGCCGACTTCACCCGGATGGCTGAAATCCGCTACGG
GATCATTCCCGCGCTCCAGAAAGAGCTGGCCGAACTGAAAACCCGCCTCGAGAACCGGCCCGGGCGGCTGCTCAAGGAAG
AAGTCGACGAGCAGGACGTGGCCGAGATCGTGGCCAAGTGGACCGGCATTCCGGTGTCCCGGATGCTCGAGGGCGAAACC
GAGAGACTGATCCGGCTCGAGGAGAACCTCCACCGCCGGGTCGTCGGGCAGCACCACGCGGTGACCGCCGTCGCGGACGC
CATCCGGCGCGCCCGGGCCGGCATTGGGGACCCGAACCGGCCGATGGGCTCCTTCATGTTCCTGGGGCCGACCGGGGTGG
GCAAGACCGAACTGGCCAAGGCGCTGGCCGAGTTCCTGTTCAACGACGAGCGCGCCCTGCAACGGTTTGACATGAGCGAG
TACATGGAGAAGCACGCCGTCGCGCGTCTGATCGGGGCGCCCCCGGGGTACGTGGGGTACGAGGAAGGCGGGCAGCTCAC
CGAAACGGTGCGCCGCCGGCCTTACGCCGTGCTGCTCTTCGACGAGATGGAAAAGGCGCACCCGGAGGTGTTCAACATTC
TGCTCCAGCTCCTGGACGACGGGCGGCTGACCGACGGGCACGGCCGGACGGTGGACTTCACTAACACGGTGGTGATCATG
ACCTCCAACGTGGGCAGCCACTACTTCCGGGAAATGGCCGGGCGGCCCCGGACGGAGATCGAGGGGCTGGTCCTGGAGAC
CCTGCGGCAGCACCTGCGGCCCGAGTTCCTGAACCGGATCGACGAGATCCTGGTGTTCGAGCCGCTGGGCGCGGAGCACC
TGCAGGCCATCGTCGACATCCAGCTGGAACGCCTGGCCGCCAGGCTGGCCAAACAGAACATCACCCTGGAGGTCACGGCG
GAGGCCAAGGAACTGCTGGCGCGGGAGGGATACGACCAGGTGTACGGGGCCCGGCCCCTGAAGCGGGTGATCCAGAAGCG
CCTGGAAAACCCCCTGGCCAAGAGCATCCTCGCCGGGGAAATCACCCCCGGCCAGGAAGTCCGGGTGACCCTCGGGGACA
ACGGCACCCTCCTCTTCACCCCGGCCTAG

Protein sequence :
MMRLDKLTIRAQEAFEAARAAAEQYNHQAIDSEHLLAGLLQPEQSTVHLILGRLEVTPAALLERLREELKRKPRVSGAGT
GQVYVTPNVQKVLEQAWAEAGKLKDEFLSTEHLLLALAGPDGGNAGGLLKQHGVTPDRILQALKEVRGTQRVTDPNPEDK
YRALDRFTQDLTKLAAQNKLDPVIGRDDEIRRVMQVLSRRTKNNPVLIGEPGVGKTAIAEGLARRINAGDVPETLKNKRL
LAFDIGALVAGAKYRGEFEDRLKAVLKEITESHGEIILFIDELHTLVGAGKAEGAIDAANMLKPALARGELRCIGATTLD
EYRKHIEKDPALERRFQPVYVGEPDAADTIAILRGLKERYEVHHGVRIKDSALVAAATLSDRYITERFLPDKAIDLIDEA
AAKLRTELDSRPAEIDEVDRRVRQLEVERQALLKEEDEASRERLARLEEEKARAEERLAKLQALWDEEKNLIQQGRLLKE
RIEDARTEDEAAERNADFTRMAEIRYGIIPALQKELAELKTRLENRPGRLLKEEVDEQDVAEIVAKWTGIPVSRMLEGET
ERLIRLEENLHRRVVGQHHAVTAVADAIRRARAGIGDPNRPMGSFMFLGPTGVGKTELAKALAEFLFNDERALQRFDMSE
YMEKHAVARLIGAPPGYVGYEEGGQLTETVRRRPYAVLLFDEMEKAHPEVFNILLQLLDDGRLTDGHGRTVDFTNTVVIM
TSNVGSHYFREMAGRPRTEIEGLVLETLRQHLRPEFLNRIDEILVFEPLGAEHLQAIVDIQLERLAARLAKQNITLEVTA
EAKELLAREGYDQVYGARPLKRVIQKRLENPLAKSILAGEITPGQEVRVTLGDNGTLLFTPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-98 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daud_0452 YP_001716630.1 ATPase VFG2076 Protein 3e-111 44
Daud_0452 YP_001716630.1 ATPase VFG2084 Protein 2e-99 41