Gene Information

Name : Daud_2215 (Daud_2215)
Accession : YP_001718334.1
Strain : Candidatus Desulforudis audaxviator MP104C
Genome accession: NC_010424
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 2328620 - 2329048 bp
Length : 429 bp
Strand : -
Note : TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: chy:CHY_0036 single-strand binding protein

DNA sequence :
ATGTTAAACAAAATAATCCTGATCGGGCGTCTGGCCAGGGATCCCGAACTCCGGTACACGCCGAGCGGGACACCGGTGGC
CGGGTTCACCGTGGCGGTCGATCGCCCCTTTGTGGACAAACAGGGGAACCGGGGTACCGATTTCATCGACGTGGTGGCCT
GGCGCAAACTGGGTGAGACTTGTGCGCGGCATCTGGGCAAGGGGCGGCTTGTGTGTGTGGAGGGGCGCCTGGAGTTGCGG
TCGTATGAGGACAACCAGGGTATCCGGCGCAAGGTGGCCGAGGTGATCGCCGATAACGTCCGGTTTCTGGACGGACCGCG
AGGTCTGGGCACACCGCACGACCAGAATGAGCAGGTCAAATCAGGTGAAGGACAACCCTACCGGAACGAGATTGATTTTT
CCGACGATGACGAACCACTGCCGTTTTAA

Protein sequence :
MLNKIILIGRLARDPELRYTPSGTPVAGFTVAVDRPFVDKQGNRGTDFIDVVAWRKLGETCARHLGKGRLVCVEGRLELR
SYEDNQGIRRKVAEVIADNVRFLDGPRGLGTPHDQNEQVKSGEGQPYRNEIDFSDDDEPLPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 6e-24 51
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 4e-25 51
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 3e-25 51
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 6e-24 50
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 2e-21 48
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 5e-26 45