Gene Information

Name : Daud_2211 (Daud_2211)
Accession : YP_001718330.1
Strain : Candidatus Desulforudis audaxviator MP104C
Genome accession: NC_010424
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 2325545 - 2326873 bp
Length : 1329 bp
Strand : -
Note : KEGG: dsy:DSY5029 hypothetical protein; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase, N-terminal domain protein; DnaB domain protein helicase, C-terminal domain protein; SMART: AAA ATPase

DNA sequence :
ATGGAACTTAAGCGGATCCCGCCCCAGAATATCGACGCCGAACAGGCCGTGCTTGGCGCTCTGTTTCTGGAACCGGAAGC
CTTCTACCGGGTGGCGGACATCATCCGGCCCGGGGATTTCTATCAGCACGGTCACCGGTTGATTTACGAGGCGGTGGTCG
GACTGCAGGAGGAAGGACAACCGGTTGATCTGGTTACGGTCACCGACCGGCTCCGCCGTGACGGAGTGCTGGAGAAGGTC
GGGGGCGCGGCGTATGTGGCGTCCCTGGTTGAAATGGTGCCGGCGGCGACCAATATCGAGTACTACGCCCGGATCATCGA
GGAGAAGGCGTTGCTTCGGACGTTGATTTCGGTGGCGGCACGGATCTCCGAGATGGGGTATGACGAGCGGGAGGCGGCCG
ACCGTCTGGTGGACCAGGCCGAGCAGATGATCATGGAATTGGGCGCGCGGCGCACGCCCGGAACCTTCGTGCCCCTGAAG
GATATCCTGGCCCGGGCTCTGGAGCGGATCGAGCAGACCTACCTTAATAAAGGCCGGATTGCCGGCGTGCCCACCGGTTT
TGTGGACCTGGACCGCCTCTGTTCGGGCCTGCAGCCTACCGACCTGATCATCCTGGCGGCGCGGCCCAGCATGGGCAAGA
CGGCGCTGGCTTTGAACATCGCCTACGAGGTGGCGGCCCGTCAGGGCCTGCCGGTGGCCTTGTTCAGTCTGGAGATGGGA
AAGGAGCAGTTGGTCAACCGGCTGCTCTGCGCCGAGGCCCGGGTGGACCAGCACCGTCTGCGGACGGGAAACCTGCGCGA
CGAGGACTGGGAACGGTTGACCGAGGCTGCGGCCCAACTCCAGGACGTGCCGCTTTTCATCGATGACACCGGAGGCGCCT
CCCTGCGGGACATCCGGGCCCGGGCCAAAAGGCTGCAGGCCGAAAGGGGCCTGGCCCTCGTGATCATCGACTACGTGCAG
TTGATGCAGCCCAACCGGCGCGCGGAGAACCGCCAGCAGGAGATCGCGCAGATTTCCCGGGGCCTGAAAGAATTGGCCAA
GGAACTGGATGTCCCGGTGCTGGCCCTCTCCCAGCTGTCCCGCGCCGTGGAGCAGAGGCAGGAAAAGAGACCGCAGATGT
CCGACCTGCGAGAGAGTGGGAGCCTGGAGCAGGACGCCGATGTGGTGTTGTTTATCTACCGTGAGGAGTATTACCGGCCG
GAGACCGATCGGAAAGCGATTGCCGAGATCATCGTGGCCAAGCAGCGTAACGGGCCGGTGGGTACGGTGGAATTGGGCTT
TTTCAAGGAGTTTCCCCGCTTCTTCCCCCTGAGGAAGGAGCCCGAATGA

Protein sequence :
MELKRIPPQNIDAEQAVLGALFLEPEAFYRVADIIRPGDFYQHGHRLIYEAVVGLQEEGQPVDLVTVTDRLRRDGVLEKV
GGAAYVASLVEMVPAATNIEYYARIIEEKALLRTLISVAARISEMGYDEREAADRLVDQAEQMIMELGARRTPGTFVPLK
DILARALERIEQTYLNKGRIAGVPTGFVDLDRLCSGLQPTDLIILAARPSMGKTALALNIAYEVAARQGLPVALFSLEMG
KEQLVNRLLCAEARVDQHRLRTGNLRDEDWERLTEAAAQLQDVPLFIDDTGGASLRDIRARAKRLQAERGLALVIIDYVQ
LMQPNRRAENRQQEIAQISRGLKELAKELDVPVLALSQLSRAVEQRQEKRPQMSDLRESGSLEQDADVVLFIYREEYYRP
ETDRKAIAEIIVAKQRNGPVGTVELGFFKEFPRFFPLRKEPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 1e-75 44
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 2e-80 43
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 4e-78 43
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 1e-78 43
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 4e-65 42
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 4e-70 42
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 4e-73 42
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 3e-68 41
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 3e-68 41