Gene Information

Name : Daud_0181 (Daud_0181)
Accession : YP_001716377.1
Strain : Candidatus Desulforudis audaxviator MP104C
Genome accession: NC_010424
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 206297 - 208735 bp
Length : 2439 bp
Strand : +
Note : PFAM: UvrB/UvrC protein; AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: chy:CHY_2348 negative regulator of genetic compete

DNA sequence :
GTGTACGGACGTTTTACCAGGCGGGCTCAGAAAGTGATCATGCTGGCGCAGGAAGAAGCCAGGAAACTCGGGTACCCATA
CATTGGCACCGAACACCTGCTCCTCGGCTTAATCCGCGAGGGTGAGGGGGTGGCGGCCAGAGCGCTGGCCGAAATCAAAA
TCGACCCCCGCAAGATCCGCGCGGCGATCGAGAAAATGGTGGAGCCGGGCCAGGGCGGTGGAGCCCTGGTCGAGGTTTCT
TTCACCCCGCGGGCGAAAAAGGTGCTGGAGTTGTCCATTGACGAAGCGCGGCGCCTGGGCCACAGCTACGTGGGCACCGA
ACACATTCTGCTTGGTTTGATCCGGGAGGGCGAAGGCGTGGCGGCCCAGGTTCTAACCGGTATGGGTGCCGACCTGGAAA
GAGTCAGACACCTGATTCTGCAATTTCTCGGCGGCCCGGGGCCGGCAGAAGGCGTCCCCGGGCGGGCGCAGCAGCCGGCA
CAGACAAACACCCCGAACCTCGACCAGTACGCCCGCGACCTGACGGCGCTTTCCCGGGACGGAAAGCTCGATCCGGTAAT
CGGGCGCAACCGGGAAATCGAGCGGGTGATTCAGATCCTGAGCCGGCGTACCAAGAACAACCCGGTCCTGATCGGCGACC
CGGGCGTGGGCAAGACGGCGATCGCGGAGGGCCTCGCGCAGCGGATCAGCGACGGGAACGTACCCGAGGTTCTGACCGGC
AAGCGGGTGATCGCCCTGGATCTGGCCTCCCTGGTGGCCGGGACCAAGTACCGGGGTGAGTTCGAGGAGCGGCTGAAAAA
GGTGCTGGAGGAGATTAGGACCGCAGGCAACATTGTCCTTTTCATCGACGAACTGCACACCCTGGTTGGGGCCGGGGCGG
CCGAAGGGGCCATCGACGCCGCGAACATTCTGAAGCCGGCGCTGGCGCGGGGGGAGTTGCAGACTATCGGGGCGACCACC
CTGGATGAATACCGCAAGCATGTGGAGCGGGACCCGGCCCTGGAACGGCGTTTCCAGCCGATCATGGTCGAAGAACCCAC
GGTTGAAGAAACCATCGCCATTCTGCGCGGCTTGAGGGACCGCTATGAGGCGCACCACCGGGTCCGTATCACCGATGACG
CCCTGGAGAGCGCGGCCCGGCTTTCGGACCGGTACATCGCCGACCGGTTCTTACCGGACAAGGCTATCGACCTGATCGAC
GAGGCTGGTTCCCGGGTACGGCTCCAGGCTTTCACCATGCCACCCGAGCTGAAAGAGCTTGAACAGCGGGTGGAGGAGTT
GCGCAAGGAGAAGGAAGCGGCGGTAGCGGCGCAGGAGTTTGAGAAAGCGGCCCAACTGCGCGATCAGGAACAGAAAATGC
GGGCCGAACTCCAGTCCTCCTTGGAAGACTGGCGACAGCAGAAGGGTGGCGACGAACTGGTGGTCGATGAACAGGATATC
GCGCACATCATCTCCAGTTGGACCGGCATTCCGGTCAAAAAACTGGCGGAGGAAGAAACCGAAAAGCTTTTGCGGATGGA
AGACCTCCTGCACGAGCGGGTGGTGGGACAGGACGAAGCCGTCAGGGCGGTTTCCCGGGCCATTCGCCGGGCGCGGGCTG
GTTTAAAGGACCCCCGGCGGCCGATCGGGTCATTTATCTTTCTCGGCCCTACCGGGGTGGGCAAGACAGAGCTGGCCCGG
GCGCTGGGCGAGGCGCTGTTCGGCGACGAGGACGCCCTGGTGCGGATCGACATGTCGGAATACCAGGAACGCCACACCGT
GTCGCGGCTGGTGGGCGCGCCCCCCGGCTACGTTGGCTACGACGAGGGCGGCCAACTCACGGAGGCGGTGCGGCGCCGCC
CATACACGGTGGTGCTGCTGGACGAAATTGAAAAGGCCCATCCGGAGGTGTTCAACATTCTACTGCAGGTCTTGGAAGAC
GGCCGGTTGACCGACGCCCGGGGCCGCACAGTGGATTTCCGGAACACGGTGATCATCCTGACTTCCAACGTCGGGGTCAA
CCTCATTCAGAAGGAGACCAAGATGGGCTTCGTGACCGTGGAGGACCAGGCCGCGACCTACGAGCGCATGAAAGAGAAGG
TGATCGGTGAGCTGCACCGGACTTTTCGTCCGGAGTTCCTCAATCGCCTGGACGAAATCATCGTCTTCCACGCTCTAACC
GGCGCGCACATTCGACAGATTGTGGAGTTGATGCTCCAGGATGTGGCCCGCCGACTGGAAGAAAACGAAGTGCAGGTCGA
GTTCTCCGACGAGGTGAAAGACTTGCTGGCCCGGGAAGGTTTCGACGAGAAATTCGGGGCGCGCCCGCTGCGCCGGACCA
TTCAGCGGCGGATAGAGGATAAACTGTCCGAGGAACTGATCCGGGGCGCCTTCAAACGGGGGGACCGGCTGCTCCTGGAC
GCCCGGGACGAGGAGATCACCGTGCGGACGGTGGGATAA

Protein sequence :
MYGRFTRRAQKVIMLAQEEARKLGYPYIGTEHLLLGLIREGEGVAARALAEIKIDPRKIRAAIEKMVEPGQGGGALVEVS
FTPRAKKVLELSIDEARRLGHSYVGTEHILLGLIREGEGVAAQVLTGMGADLERVRHLILQFLGGPGPAEGVPGRAQQPA
QTNTPNLDQYARDLTALSRDGKLDPVIGRNREIERVIQILSRRTKNNPVLIGDPGVGKTAIAEGLAQRISDGNVPEVLTG
KRVIALDLASLVAGTKYRGEFEERLKKVLEEIRTAGNIVLFIDELHTLVGAGAAEGAIDAANILKPALARGELQTIGATT
LDEYRKHVERDPALERRFQPIMVEEPTVEETIAILRGLRDRYEAHHRVRITDDALESAARLSDRYIADRFLPDKAIDLID
EAGSRVRLQAFTMPPELKELEQRVEELRKEKEAAVAAQEFEKAAQLRDQEQKMRAELQSSLEDWRQQKGGDELVVDEQDI
AHIISSWTGIPVKKLAEEETEKLLRMEDLLHERVVGQDEAVRAVSRAIRRARAGLKDPRRPIGSFIFLGPTGVGKTELAR
ALGEALFGDEDALVRIDMSEYQERHTVSRLVGAPPGYVGYDEGGQLTEAVRRRPYTVVLLDEIEKAHPEVFNILLQVLED
GRLTDARGRTVDFRNTVIILTSNVGVNLIQKETKMGFVTVEDQAATYERMKEKVIGELHRTFRPEFLNRLDEIIVFHALT
GAHIRQIVELMLQDVARRLEENEVQVEFSDEVKDLLAREGFDEKFGARPLRRTIQRRIEDKLSEELIRGAFKRGDRLLLD
ARDEEITVRTVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daud_0181 YP_001716377.1 ATPase VFG0079 Protein 0.0 64
Daud_0181 YP_001716377.1 ATPase VFG0080 Protein 2e-141 51