Gene Information

Name : Daud_1762 (Daud_1762)
Accession : YP_001717890.1
Strain : Candidatus Desulforudis audaxviator MP104C
Genome accession: NC_010424
Putative virulence/resistance : Virulence
Product : flagellar protein export ATPase FliI
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : 3.6.3.15
Position : 1853891 - 1855255 bp
Length : 1365 bp
Strand : -
Note : KEGG: mta:Moth_0774 ATPase FliI/YscN; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; H+-transporting two-sector ATPase, alpha/beta subunit domain protei

DNA sequence :
TTGTCGGAAAGGACCCAAAATCTGGACTTGAATGCCTGGCGCGCCCGGGTGAACGCGGTACGTCCGTTCCGGCTGCTCGG
CCGGGTGACCAAAGTGGTCGGCCTGACGGTGGAAGTGGAGGGCTTGAACTCTTTTATCGGGGAGATCTGTGAGGTGTACG
TTCCGGGGGAGATCCAGCCGGTCCGGGGCGAGGTTGTCGGTTTCCGGGGCGGGACTTCCCTGCTCATGCCGCTGGGTGAG
TTGCGGGGGATCAGGCCGGGCTGCCGGGTGGAACCGCTCGGCCGGGCGCTCACGGTCCGGGTGGGGGAACACCTCCTTGG
GCAGGTGGTGAACGGCCTCGGGTACCCGCTGGCTAACGGCGGCGATACCCGAAACGGCACCCGCCCGGATGGGGCTGAAG
AGTACCCGGTGCACAACGCGCCGCCTGACCCGCTCAGCCGGCGCCGCATCGACCGCCCGCTGGAGACGGGGGTGCGGGCG
ATCGACGGTTTTCTGACCTGCGGGCGAGGGCAGCGCCTGGGGGTTTTCTCGGGGAGCGGCGTGGGCAAGAGCGTGCTTTT
GGGGATGCTTTGCCGACACTGCAGCGCCGATGTCAACGTAGTAGCTCTGGTGGGCGAGCGGGGCCGCGAGGTCAAGGATT
TCATCGAGCGCGACCTGGGGCCGGAGAGCTTGGCCCGCTCGGTGGTCGTGGTGGCCACCTCCGATCAGCCGGCGCTGATC
CGGCTGCGGGCGGCGATGGTGGCCACGGCGATTGCCGAGTACTTCCGGGACCGGGGCAAAGACGTTTTGTTCCTGATGGA
TTCGGTCACCCGGTTTGCGCTGGCGCAGCGGGAGGTGGGCCTGGCGGTGGGCGAGCCGCCGACCACCCGGGGGTACACCC
CCTCGGTGTTCGCCTTGCTCCCCAAGCTTCTGGAGCGCGCCGGGACGAGCCCGGCGGGTTCGATCACCGGCTTTTACACC
GTGCTCGTGGAGGGGGACGACCTGCAGGAACCGGTGGCGGACGCGGTGCGGAGCATCCTGGACGGCCATATCGTCCTGGA
CCGGGAGTTGGCGGCGAAAAACCACTACCCGGCCATCGACGTTCTGCAGAGCGTGAGCCGCCTGATGCCCGACATCACGG
CCCCGGAGCACCAGCGCTGCGCGGCGAAGCTCCGGCGGTTGCTGGCCGCCTTTAAACAGGCGGAGGACCTGGTGAACATT
GGGGCGTACGTGTCCGGTTCGAACCCCCTGGTGGACGAGGCCCTGGCCAAGCACGAAGCGATTATGGAGTTCCTGCGGCA
GGACCATACGGAGTTCGGCGGTTTTGCCGAGTCCCTGGCCCGGCTGCAATACCTCGCGGGGGAAGCGGGTGCCGCCGGTG
CCTAA

Protein sequence :
MSERTQNLDLNAWRARVNAVRPFRLLGRVTKVVGLTVEVEGLNSFIGEICEVYVPGEIQPVRGEVVGFRGGTSLLMPLGE
LRGIRPGCRVEPLGRALTVRVGEHLLGQVVNGLGYPLANGGDTRNGTRPDGAEEYPVHNAPPDPLSRRRIDRPLETGVRA
IDGFLTCGRGQRLGVFSGSGVGKSVLLGMLCRHCSADVNVVALVGERGREVKDFIERDLGPESLARSVVVVATSDQPALI
RLRAAMVATAIAEYFRDRGKDVLFLMDSVTRFALAQREVGLAVGEPPTTRGYTPSVFALLPKLLERAGTSPAGSITGFYT
VLVEGDDLQEPVADAVRSILDGHIVLDRELAAKNHYPAIDVLQSVSRLMPDITAPEHQRCAAKLRRLLAAFKQAEDLVNI
GAYVSGSNPLVDEALAKHEAIMEFLRQDHTEFGGFAESLARLQYLAGEAGAAGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscN AAO18044.1 LscN Virulence TTSS locus Protein 1e-93 56
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 7e-80 54
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 5e-88 52
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 5e-88 52
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-86 52
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 8e-87 52
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 6e-88 52
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 1e-86 52
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 1e-87 52
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-86 52
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-86 52
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-71 51
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 8e-72 51
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 8e-72 51
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 8e-72 51
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-71 51
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 3e-74 50
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 3e-74 50
escN CAC81862.1 EscN protein Virulence LEE II Protein 5e-73 50
escN CAI43874.1 EscN protein Virulence LEE Protein 3e-73 50
unnamed AAL06369.1 EscN Virulence LEE Protein 2e-73 50
escN AAK26715.1 EscN Virulence LEE Protein 7e-73 50
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 5e-73 50
escN AAL57542.1 EscN Virulence LEE Protein 7e-73 50
escN YP_003223475.1 translocator EscN Virulence LEE Protein 4e-73 50
escN AAC38383.1 EscN Virulence LEE Protein 2e-72 49
escN YP_003236088.1 translocator EscN Virulence LEE Protein 6e-72 49
escN AAC31513.1 L0034 Virulence LEE Protein 1e-72 49
escN NP_290268.1 hypothetical protein Virulence LEE Protein 1e-72 49
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 1e-72 49
ECs4568 NP_312595.1 EscN Virulence LEE Protein 1e-72 49
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 6e-62 48
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 5e-65 47
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 5e-66 47
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 4e-63 46
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 8e-66 46
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 2e-61 45
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 8e-69 45
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 2e-61 45
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 2e-68 44
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 2e-74 44
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 5e-68 44
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 3e-68 44
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 5e-62 43
invC AAS66861.1 InvC Not tested SSR-2 Protein 2e-60 42
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 4e-62 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daud_1762 YP_001717890.1 flagellar protein export ATPase FliI VFG0390 Protein 1e-89 54
Daud_1762 YP_001717890.1 flagellar protein export ATPase FliI VFG0192 Protein 8e-93 54
Daud_1762 YP_001717890.1 flagellar protein export ATPase FliI VFG0048 Protein 2e-91 54
Daud_1762 YP_001717890.1 flagellar protein export ATPase FliI VFG1254 Protein 6e-89 53
Daud_1762 YP_001717890.1 flagellar protein export ATPase FliI VFG2144 Protein 1e-86 52
Daud_1762 YP_001717890.1 flagellar protein export ATPase FliI VFG0515 Protein 5e-72 51
Daud_1762 YP_001717890.1 flagellar protein export ATPase FliI VFG2331 Protein 2e-75 49
Daud_1762 YP_001717890.1 flagellar protein export ATPase FliI VFG0730 Protein 1e-72 49
Daud_1762 YP_001717890.1 flagellar protein export ATPase FliI VFG0812 Protein 6e-73 49
Daud_1762 YP_001717890.1 flagellar protein export ATPase FliI VFG2499 Protein 2e-79 48
Daud_1762 YP_001717890.1 flagellar protein export ATPase FliI VFG2459 Protein 7e-69 45
Daud_1762 YP_001717890.1 flagellar protein export ATPase FliI VFG1778 Protein 5e-66 45
Daud_1762 YP_001717890.1 flagellar protein export ATPase FliI VFG1008 Protein 2e-59 44