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Name : Daud_0013 (Daud_0013) Accession : YP_001716214.1 Strain : Candidatus Desulforudis audaxviator MP104C Genome accession: NC_010424 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 14657 - 15934 bp Length : 1278 bp Strand : + Note : KEGG: chy:CHY_2697 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase, class II (G, H, P and S); seryl-tRNA synthetase, class IIa DNA sequence : ATGCTGGACCTGAAGTTCATCCGGAAACACCCGGAGGCCGTCCGGATGGCCCTCGAGAAACGGGGGGCCGAATTCGATCT GGACCGCTTGTTGGACCTGGACGACGAGTGGCGCCAGAAGCTGTTCACGGTGGAGAGGCTCAAGAACCGCCGGAACGCGG TTTCGGAGGAGATCGCCCGCCTGAAGAAGGCCGGCGAGCCGGCCGAAGAGCTGATTGCGGAAATGCGGAATGTGTCTCAG CAAATCCGGGAATTGGACGGGGAAATCCGGCAGGTGGAAGAAAACCTGCAGGCACTTTTGCTCCAGGTGCCGAACATCCC CCACCCGCTGGTCCCCTTCGGGCGGGCGGACACGGACAATGAAGAGGTGCGCCGCTGGGGCGAGCCGCCCGCGTTCGGGT TTGAGCCGCGCCCGCACTGGGAACTGGGGGAGGAGCTGAACATCCTTGACTTTGCCCGGGGCGGCAAGGTGAGCGGGGCG CGGTTCAGCTTTTGCCGGGGTGCGGGCGCCCGCCTGGAACGGGCCCTGATCTGTTTCATGCTGGATTTGCACGTGGACCG GCACGGTTACACCGAACTGTTCCCGCCCTTCCTGGTGAACGCCCAGAGTATGACCGGCACCGGGCAGTTGCCAAAGTTCG CCGCCGACATGTATAAGGTGGAAAACGAGGACTACTACCTGGTGCCCACGGCCGAGGTTCCGGTCACGAACTATCTGCGG GACGAAATCCTGGACGGGGACACCCTGCCCCGCAAGTACGCGGCGTACAGCGCCTGCTTCCGCGCCGAGGCTGGCGCGGC CGGGCGGGATACCCGGGGCCTGATCCGACAGCACCAGTTCAACAAGGTCGAACTGGTGAAGTTCACCCGGCCGGAGGATT CCGAGGACGAACTGGAAAAGCTCGTGCGCGACGCCGAGGAGGTCCTGCGGCTTCTGAGGCTCCCGTACCGGGTGGTGCTC CTGTGCACCGGTGACCTGGGCTTCAGCTCATCCCGGACCTACGACCTGGAGGTCTGGATGCCGGGACAGGGAGTGTACCG CGAAATCTCCTCGTGCTCGAACTTCACCGATTTTCAGGCCCGGCGGGCGAACATCAGGTACCGGGCGCACCCGCGGGCGA AGGCCGATTTCGTGCACACCTTAAACGGCTCGGGACTGGCCGTGGGCCGGACGCTGGCGGCCGTTCTGGAAAACTTCCAG CAGGCCGACGGCACGGTGACCGTTCCCGAAGTGCTGCGGCCGTACATGGGTGGAATGGAAAGGATCACCAGGAAATAG Protein sequence : MLDLKFIRKHPEAVRMALEKRGAEFDLDRLLDLDDEWRQKLFTVERLKNRRNAVSEEIARLKKAGEPAEELIAEMRNVSQ QIRELDGEIRQVEENLQALLLQVPNIPHPLVPFGRADTDNEEVRRWGEPPAFGFEPRPHWELGEELNILDFARGGKVSGA RFSFCRGAGARLERALICFMLDLHVDRHGYTELFPPFLVNAQSMTGTGQLPKFAADMYKVENEDYYLVPTAEVPVTNYLR DEILDGDTLPRKYAAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFTRPEDSEDELEKLVRDAEEVLRLLRLPYRVVL LCTGDLGFSSSRTYDLEVWMPGQGVYREISSCSNFTDFQARRANIRYRAHPRAKADFVHTLNGSGLAVGRTLAAVLENFQ QADGTVTVPEVLRPYMGGMERITRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 7e-109 | 57 |
