Gene Information

Name : Daud_1056 (Daud_1056)
Accession : YP_001717200.1
Strain : Candidatus Desulforudis audaxviator MP104C
Genome accession: NC_010424
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 1111185 - 1112942 bp
Length : 1758 bp
Strand : +
Note : PFAM: pyruvate kinase; HpcH/HpaI aldolase; PEP-utilising enzyme, mobile region; KEGG: mta:Moth_1867 pyruvate kinase

DNA sequence :
TTGCGCCATACTAAAATAATCTGCACCATTGGCCCAGCTTCGGAATCGGTCGAGGTGCTAAGCCGGATGGTCGAATCCGG
GATGAACATTTCCCGCCACAATTTCTCCCACGGTTCCCGGGAGGAACACCGCCGCCGCATCAACAACGTCCGCACGGCCG
CCGCGCGGACCGGCAGAACGGTCGGCATAATGGTCGACCTCCGGGGTCCCAAGATCAGAATCGGCGATCTGGAGCCCGAG
CCGGTCGAACTCAAGGCCGGGGATGAACTGACCCTAACCACCGAGGTAATCAAGGGAAACCGCCGCCGCATTTCGGTCGA
TTACCAGCCGTTGCCCCGGGAGGTGGGGCCGGGTAACACCATTTTGCTTGGCGACGGTCTGGTCGGGCTGGAAGTGTTGC
GGGTTGAGGGGAGCGAGGTGCTCTGCCGGGTTCTGAACGACGCCTTGCTGACCAGCCGGAAGGGCGTGAATCTGCCGGGT
GTGCGGACATCGATCCCCACCGTCACCGAGAAAGACATCAGGGACCTTCATTTCGCCTTGGAGTTGGGCTTTGATTTTGT
GGCCGCCTCGTTCGTGCGGCGGGCAGAGGACATCCTTTCGGTGCGCGCAATCCTGGAGAAGTTCGAATCAGAAGCGCACA
TCGTGGCCAAGATCGAGACCTGGGAGGCGGTCGAGAACCTGGACGACATCATTAAGGTGACGGACGCGGTGATGGTGGCA
CGCGGTGACTTGGGGCTGGAGATCGCCGCCGAGGAAGTGCCCCTGGTTCAGAAAAAGATCATCGCCCGTTGCAACCTGGC
CGGCAAGCCGGTGATCACCGCGACTCAGATGCTGGAATCAATGATCCACAACCCGCGTCCAACCAGGGCCGAGGCTAGTG
ACGTGGCCAACGCGATTTTGGACGGTACGGACGCCGTGATGCTTTCGGCGGAAACCGCGACCGGGGAATACCCGGTGGCC
GCGGTGGAAACCATGGACCGCATCGCCCGTCGGGCGGAAGCCGACCTTCCCTACGGAATGCTGCTTCACCAGCGGCACCG
GGACATCTCCCGCCGCACGGTCACCGACGCCATCAGCTACGCCACCTGTGCCACCGCCGCCGACCTCGACGCCGCCGCCA
TCATTACGGCTACCCAGACCGGGTATACGGCGCGGATGGTGGCCAAGTACCGGCCAGCGAGGCCGATTGTGGCCGTAACA
CCTCGGGAAGACGTGGTGCGGCGCCTGACCCTGTTGTGGGGGGTGCAGCCGGTCTACGTTCAAGAGGAGATCGAGGACAC
CGACCGGATGATCTCGGCCTCCATTGAAGCCGCCCTGGCCGCCGGTCTCATCCGCGGCGGCGACCTGGTGGTGATCACCG
CCGGCGTGCCGGTGGGCCTGCACGGCAGCACCAACCTGCTCAAAGTGCACACCGTGGGCAATGTCCTGGCCCGGGGCATC
GGGATCGGCAACCAGGCGGTGACCGGCAGCCTGAAAATCGCGCACAGCGCTGCGGAAGCCCTGGTCAAGATCGAGCCGGG
GGACATCCTGGTCACCCGGGCCACCGACCGGGATTATGTTCCGGCGATCGAAAAGTCATCCGGAGTGATCACCGAAGTCG
GCGGGCTGACCTCACACGCCGCCGTGGTGTGCCTGCAGTTCAACCTGCCGGTGATCGTGGGGGTTACGGGGGCGACCGAG
ATTCTTGACGAAGGGGCGATTGTGACCATCGACGCGTTGCGGGGGTTGGTTTACAGCGGCGCCACCCGCGTGCTCTAG

Protein sequence :
MRHTKIICTIGPASESVEVLSRMVESGMNISRHNFSHGSREEHRRRINNVRTAAARTGRTVGIMVDLRGPKIRIGDLEPE
PVELKAGDELTLTTEVIKGNRRRISVDYQPLPREVGPGNTILLGDGLVGLEVLRVEGSEVLCRVLNDALLTSRKGVNLPG
VRTSIPTVTEKDIRDLHFALELGFDFVAASFVRRAEDILSVRAILEKFESEAHIVAKIETWEAVENLDDIIKVTDAVMVA
RGDLGLEIAAEEVPLVQKKIIARCNLAGKPVITATQMLESMIHNPRPTRAEASDVANAILDGTDAVMLSAETATGEYPVA
AVETMDRIARRAEADLPYGMLLHQRHRDISRRTVTDAISYATCATAADLDAAAIITATQTGYTARMVAKYRPARPIVAVT
PREDVVRRLTLLWGVQPVYVQEEIEDTDRMISASIEAALAAGLIRGGDLVVITAGVPVGLHGSTNLLKVHTVGNVLARGI
GIGNQAVTGSLKIAHSAAEALVKIEPGDILVTRATDRDYVPAIEKSSGVITEVGGLTSHAAVVCLQFNLPVIVGVTGATE
ILDEGAIVTIDALRGLVYSGATRVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 2e-78 47
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 2e-78 47
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 2e-78 47
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 3e-78 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daud_1056 YP_001717200.1 pyruvate kinase VFG0479 Protein 9e-79 47