Gene Information

Name : kdsD (ABAYE2492)
Accession : YP_001714315.1
Strain : Acinetobacter baumannii AYE
Genome accession: NC_010410
Putative virulence/resistance : Virulence
Product : D-arabinose 5-phosphate isomerase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0794
EC number : 5.3.1.13
Position : 2539583 - 2540560 bp
Length : 978 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type e : enzyme

DNA sequence : 
ATGCCTAATCCTACAGATTTCCAAAGCAGTGCATTAGCGACATTGCGCATTGAGCAACAAGCCATAGATGTATTAGCAAC
ACAAATTGATGACCGTTTTAATCGTGCTTGTGAAATATTATTACAATGCAAAGGTCGTGTTGTGATCACGGGTATGGGTA
AATCTGGGCATATTGGCCGAAAAATGGCAGCGACATTTGCTTCGACAGGCACGCCGTCTTTCTTTATGCATCCTGGCGAA
GCAGGGCATGGCGATTTAGGAATGCTGGTTCGTGGCGATGTACTTATTGCAATTTCCAACTCGGGAAAAAGCGATGAAAT
CATGATGTTGATGCCACTCATTAAGCATCTTGGTGTACCTCTTATTACGATTAGTCGTGATGATAAAGGCCCAATGCCGC
AAAATGCAGATATTGCTTTAACTCTGGGTGAGTCTGACGAAGCATGCCCTTTAGGTTTAGCGCCTACTTCAAGTACGACA
GCGACTTTGGTTTTAGGCGATGCTTTAGCAGTTGCTTTACTTGAAGCTCGTGGTTTTACTGCTGATGACTTTGCTCGTTC
GCATCCGGCAGGTGCGTTGGGTAAGCGTTTACTGTTACATGTAAAACATTTAATGCATACAGGCGAAGAGTTACCAAAAG
TTTCACCTGATACACCAATGAATCAAGTACTTTACGAGATCTCAAATAAGCGTTTAGGCTTGACAACAATTGTTGATGAA
CAAGACCATCTACTTGGTATTTTTACAGATGGGGATTTACGTCGTCTCATCGATAAACAGCAAGGGTTTGATGTAAATTT
ACCTGTGTCTGAAGTGATGACAAAGAAACCGTCAACGATCTCTCAAGAAGCACGAGCTGTAGAAGCTTTACAACAACTTA
ACCAGAAAAAAATCAGTCAGTTTGTAGTAGTCGATGACCAGAACAAAGTGATTGGTGTAATTAGTATGCATGACCTTATT
CAGGCAGGGGTGAATTAA

Protein sequence : 
MPNPTDFQSSALATLRIEQQAIDVLATQIDDRFNRACEILLQCKGRVVITGMGKSGHIGRKMAATFASTGTPSFFMHPGE
AGHGDLGMLVRGDVLIAISNSGKSDEIMMLMPLIKHLGVPLITISRDDKGPMPQNADIALTLGESDEACPLGLAPTSSTT
ATLVLGDALAVALLEARGFTADDFARSHPAGALGKRLLLHVKHLMHTGEELPKVSPDTPMNQVLYEISNKRLGLTTIVDE
QDHLLGIFTDGDLRRLIDKQQGFDVNLPVSEVMTKKPSTISQEARAVEALQQLNQKKISQFVVVDDQNKVIGVISMHDLI
QAGVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 9e-54 43
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 1e-53 42
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 2e-53 42