Gene Information

Name : kdpB (ABAYE1421)
Accession : YP_001713330.1
Strain : Acinetobacter baumannii AYE
Genome accession: NC_010410
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase subunit B
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : 3.6.3.12
Position : 1478038 - 1480077 bp
Length : 2040 bp
Strand : +
Note : One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions

DNA sequence :
GTGAAAATGAATACACAAACTCATGTAAATAGCCATAAACAAACCATGGCAGTGCCAAATTTTGAAGTTTGGAAAAATGC
ATTTGTGAAACTGCTACCACAGCATGCAATTAAAAACCCTGTGATGGCAATTGTATGGCTTGGAACAGTGGTTACAGGCA
TTAGTACAATCTTAGGTTACACCACGCTGATATTTGGTTTAATGGTTACAGCAATTCTGTTTATTACCATTTTATTTGCT
AACTATGCCGAGGCTGTTGCAGAGGCTAGAGGCCGTGGGCAGGCATCTTCATTACGTGCAGCAAGAGAAAATTTAACGGC
TCGAAGACTCAACTCTTTGACAGACCGTCAAGCGACTCAAGTTGCAGCGACCGAACTTCATTTAAATGATTTTATTGAAG
TACATGCAGGTGAGCTTGTTCCAGCCGACGGTGAGATTGTAGAAGGCTTTGCAACTATTAATGAATCGGCTGTTACAGGT
GAGTCAGCACCTGTGCTACGTGAAGCTGGAACAGACCGTTCAGGTGTTATTGGTGGAACCAAAGTACTTACAGATCGTAT
TGTTGTGCAAGTGACTGCTGAATCTGGTCAAAGTTTCTTAGACCGTATGATTGCTTTGGTCGAAGGTTCAAATCGTCAAA
AAACACCGAATGAGATTGCGCTTGGCTTCTTGTTAATGGTGATGACAATCACGTTTTTAATTGTTGTGATTAGCTTGCCA
TTTATTGCCAAGTATTTGCATATTGAACTTGATCCAGTTGTGCTCGTGGCGTTATTGGTCTGCTTAATTCCAACAACCAT
TGGTGGCTTGTTACCTGCGATTGGTATTGCGGGGATGAACCGTGCACTCAAGGCCAATGTTTTGGCGAAATCGGGGAAAG
CAGTAGAAGTCGCGGGTGACATTGATGTGCTTTTACTCGATAAAACAGGAACCATTACTTATGGTGACCGTCAAGCGACC
TCTTTTTATCCTTTAACTTCGGTAACCGAGTCAGAGTTGAGAGCTGCTGCTTGGATAAGTTCACTTGCCGACCCAACACC
AGAAGGGAAATCAATTGTTAAGTTAGCAAAAGAGCAAGGTCTAAAACAGCAAGAACCTGAGCAAGCCGAATTTATCTCTT
TTAGTGCTTCGACTCGAATTTCTGGCGTGAATTTACCGAATGGTGACCAAATTCGTAAAGGTGCATTAGATGCAATCTTG
AAGTTTGTAAATGAAGATTATTCTCAAGATTTAGAGTTAAAAGCACGTGTTGAGCAAGTTGCCAAAAAAGGAGCAACTCC
TTTAGTCGTCGCTAATCAACATCATGTGTTGGGTGTGATTGAACTCTCAGATGTGATTAAACACGGCATTAAAGAACGTT
TTGCTCGTTTGAGAGAAATGGGTATCAGAACCGTCATGGTTACAGGTGATAACCCATTAACTGCGGCCGCGATTGCTGCT
GAAGCGGGTGTAGATGACTATATTGCCGAAGCAAAACCAGAAGACAAATTGGCCTGTATTCGCACCGAACAACAACAAGG
TCGTTTAGTTGCAATGGTCGGTGACGGAACCAACGATGCGCCGGCATTAGCACAAGCTGATATTGGTCTAGCCATGAACT
CGGGTACACAAGCTGCAAAAGAAGCCGGCAACATGGTTGATTTAGACTCAGATCCAACCAAACTACTTGCTGTGGTCGAG
ATTGGGAAACAGCAGTTGATTACCCGTGGCGCTTTAACAACATTTTCGTTAGCAAACGACGTCTCTAAATACTTTGCCAT
TTTACCTGCATTGTTCGCTGCTGCGATTCCACAAATGCAAGTATTGAATGTAATGCACTTAGCAAGTCCAAACAGCGCGA
TTTTATCTGCATTAATTTTTAACGCGATTATTATTCCGCTATTAATTCCAATCGCACTCCGAGGCGCGAAATTTAAACCT
TCAACTGCAACTCAGTTACTACGTCGAAATATGTTGATTTATGGGGTGGGCGGTGTGGTTCTACCATTCATTGCCATTAA
AGCGATTGATGTAGTAATTGTTCAATTATTTGGTTTGTAA

Protein sequence :
MKMNTQTHVNSHKQTMAVPNFEVWKNAFVKLLPQHAIKNPVMAIVWLGTVVTGISTILGYTTLIFGLMVTAILFITILFA
NYAEAVAEARGRGQASSLRAARENLTARRLNSLTDRQATQVAATELHLNDFIEVHAGELVPADGEIVEGFATINESAVTG
ESAPVLREAGTDRSGVIGGTKVLTDRIVVQVTAESGQSFLDRMIALVEGSNRQKTPNEIALGFLLMVMTITFLIVVISLP
FIAKYLHIELDPVVLVALLVCLIPTTIGGLLPAIGIAGMNRALKANVLAKSGKAVEVAGDIDVLLLDKTGTITYGDRQAT
SFYPLTSVTESELRAAAWISSLADPTPEGKSIVKLAKEQGLKQQEPEQAEFISFSASTRISGVNLPNGDQIRKGALDAIL
KFVNEDYSQDLELKARVEQVAKKGATPLVVANQHHVLGVIELSDVIKHGIKERFARLREMGIRTVMVTGDNPLTAAAIAA
EAGVDDYIAEAKPEDKLACIRTEQQQGRLVAMVGDGTNDAPALAQADIGLAMNSGTQAAKEAGNMVDLDSDPTKLLAVVE
IGKQQLITRGALTTFSLANDVSKYFAILPALFAAAIPQMQVLNVMHLASPNSAILSALIFNAIIIPLLIPIALRGAKFKP
STATQLLRRNMLIYGVGGVVLPFIAIKAIDVVIVQLFGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-136 55
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-136 55
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-136 55
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-136 55
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 1e-136 55
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 2e-136 55
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 4e-142 55
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 3e-142 55