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Name : CMS_0885 (CMS_0885) Accession : YP_001709639.1 Strain : Clavibacter michiganensis ATCC33113 Genome accession: NC_010407 Putative virulence/resistance : Virulence Product : ATP-dependent protease ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 926201 - 928393 bp Length : 2193 bp Strand : + Note : - DNA sequence : GTGGCCAACATGCAGGGCGCACCCGCCACCGACGAGAACGCGAAGACCGCGCTCGAGCAGTACGGGGTGAACCTGACCGA GATCGCGAAGAGCGGCAAGCTCGACCCGGTCATCGGACGCGACGCGGAGATCCGGCGCATCAGCCAGGTGCTCACGCGGC GCACCAAGAACAACCCGGTGCTCATCGGCGAGCCCGGCGTCGGCAAGACCGCCGTCGTCGAGGGCCTCGCGCAGCGCATC GTCGCGGGCGACGTGGCCGACTCGCTCAAGGGCAAGCAGCTGGTGTCGCTGGACCTCGCGGCGCTCGTCGCCGGAGCCAA GTACCGCGGGGAGTTCGAGGAGCGGCTGAAGGCGGTGCTGAAGGAGATCGACGACGCCGACGGCGAGATCATCACGTTCG TCGACGAGCTGCACACGCTCATGGGGGCGGGCGGCGGCGAGGGATCCGTGGCCGCGTCGAACATGCTGAAGCCCATGCTC GCGCGCGGCGAGCTGCGCCTCATCGGCGCGACCACGCTCGACGAGTACCGCCAGTACATCGAGAAGGATGCCGCCCTCGA GCGCCGGTTCCAGCAGGTGTACGTGGGGGAGCCCTCCGTCGAGGACACCATCGCGATCCTCCGTGGGCTCAAGGGCCGGT ACGAGGCGCACCACCAGGTGCCCATCACGGATGCGGCGCTCGTCGCGGCCGCGTCCCTCTCGAATCGCTACATCCCCGCC CGCCAGCTGCCCGACAAGGCCATCGACCTCATCGACGAAGCCGCGTCGCGGCTGCGGATGGAGATCGACTCGTCGCCCGT GGAGATCGACGAGCTGCGGCGCGCGGTCGACCGGATGCGGCTCGAGGAGCTCGCGCTCAAGCGCGAGAAGGACGAGGCGT CGAAGGCGCGGCTCGCGAAGCTGCGCGAGGACGTCGCGGCGCGCGAGCAGACGCTCGGCGAGCTGCAGCGCCGCTGGGAG GCGGAGCGGGCCAGCGTCAACCGCGTCGGCAAGCTGAAGGACGAGCTCAACGAGCTGCGGATCCGCGCCGAGCGGGCCCA GCGCGAGGGCAACCTGGAGAAGGCGTCGCGCCTGCTCTACGGCGAGATCCCCGTGATCGAGCGCGAGGTCGCGCAGGCGG AGGCCGCCGAGTCGGTGCCGTCGGCCGAGGACCGCATGGTGAACGAGCAGGTGACGGCCGAGGATGTGGCGGCGGTCGTC GCGGCGTGGACGGGGATCCCCGTCGGCCGGCTGCTCCAGGGCGAGACCGAGAAGCTGCTGCACCTCGAGCAGGAGCTGGG CAAGCGGCTCATCGGGCAGAAGCAGGCCGTGCGGGCCGTCGCGGACGCGGTGCGGCGCACGCGGGCCGGCATCTCGGATC CCGACCGGCCCACCGGGTCCTTCCTCTTCCTCGGGCCCACGGGCGTCGGGAAGACGGAGCTCGCGAAGGCGCTCGCCGAG TTCCTGTTCGACGACGAGAAGGCGATGGTGCGCATCGACATGAGCGAGTACGGCGAGAAGTTCGCCGTGTCGCGGCTCGT CGGAGCGCCTCCCGGGTACGTCGGCTACGAGCAGGGCGGCCAGCTCACCGAGGCCGTGCGGCGGCGCCCGTACTCGGTGG TGCTGCTCGACGAGGTCGAGAAGGCGCACCCCGAGGTGTTCGACGTGCTGCTGCAGGTGCTCGACGACGGCCGGCTCACC GACGGCCAGGGCCGCACGGTCGACTTCCGCAACGTGATCCTGGTGCTCACCAGCAACCTCGGCTCGCAGTTCATCAGCGA CGCCACGCTGCCGCTCGACCAGCGCGAGCAGGCCGTGCAGCAGCTCGTGCGCCAGACGTTCAAGCCGGAGTTCGTGAACC GGCTCGACGACATCGTGGTGTTCCAGACGCTGTCGATGGACGACCTCGCGCAGATCGTGGAGCTCTACATCGACCGGCTC GGCGTGCGCCTCTCGGACCGCCGGCTCGCGCTCGGCGTCACGCCCGACGCGCGCCGCTGGCTCGCCGAGCGCGGCCACGA TCCGCTGTACGGCGCGCGCCCGCTGCGCCGCCTCATGCAGCGCGAGATCGACGACCGCCTCGCGCGCGAGCTGCTCGCGG GCGACATCCGAGACGGCGACGCGGTGCGGGTCGACCTCGCACCCGACGGCGACGGCCTCACGGTCGCGCGCGCGTGGAGC GACGAGCCGGAGGATGCGGCGCCCGGCGCCTGA Protein sequence : MANMQGAPATDENAKTALEQYGVNLTEIAKSGKLDPVIGRDAEIRRISQVLTRRTKNNPVLIGEPGVGKTAVVEGLAQRI VAGDVADSLKGKQLVSLDLAALVAGAKYRGEFEERLKAVLKEIDDADGEIITFVDELHTLMGAGGGEGSVAASNMLKPML ARGELRLIGATTLDEYRQYIEKDAALERRFQQVYVGEPSVEDTIAILRGLKGRYEAHHQVPITDAALVAAASLSNRYIPA RQLPDKAIDLIDEAASRLRMEIDSSPVEIDELRRAVDRMRLEELALKREKDEASKARLAKLREDVAAREQTLGELQRRWE AERASVNRVGKLKDELNELRIRAERAQREGNLEKASRLLYGEIPVIEREVAQAEAAESVPSAEDRMVNEQVTAEDVAAVV AAWTGIPVGRLLQGETEKLLHLEQELGKRLIGQKQAVRAVADAVRRTRAGISDPDRPTGSFLFLGPTGVGKTELAKALAE FLFDDEKAMVRIDMSEYGEKFAVSRLVGAPPGYVGYEQGGQLTEAVRRRPYSVVLLDEVEKAHPEVFDVLLQVLDDGRLT DGQGRTVDFRNVILVLTSNLGSQFISDATLPLDQREQAVQQLVRQTFKPEFVNRLDDIVVFQTLSMDDLAQIVELYIDRL GVRLSDRRLALGVTPDARRWLAERGHDPLYGARPLRRLMQREIDDRLARELLAGDIRDGDAVRVDLAPDGDGLTVARAWS DEPEDAAPGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-98 | 43 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 2e-97 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 1e-97 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CMS_0885 | YP_001709639.1 | ATP-dependent protease ATP-binding subunit | VFG0080 | Protein | 6e-127 | 44 |
| CMS_0885 | YP_001709639.1 | ATP-dependent protease ATP-binding subunit | VFG2076 | Protein | 6e-111 | 43 |
| CMS_0885 | YP_001709639.1 | ATP-dependent protease ATP-binding subunit | VFG2084 | Protein | 5e-105 | 43 |
