|
Name : CMS_0798 (CMS_0798) Accession : YP_001709560.1 Strain : Clavibacter michiganensis ATCC33113 Genome accession: NC_010407 Putative virulence/resistance : Unknown Product : nucleotide-binding ABC transporter subunit Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 849961 - 851694 bp Length : 1734 bp Strand : - Note : - DNA sequence : GTGATGCCCGGGAACGTCGAAGACACCCTCACCGGCCAGGTGCGGCTCGGCACCGTCGTCCGCGTCGCCGACCTCGCGAT CTCCTACGCGGCGGGGAGCACCGACGTGCCGGTGGTCCGCGGCGTGAGCTTCGAGATCCGTGCCGGGCGCGCGCTCGGGC TCGTCGGGGAGTCGGGCAGCGGCAAGTCCACCGTCGCGCGGACGCTGCTCGCGCACCTGCGCCGCGGATCCCGCATCGTG GGCGGATCCGTGGAGGTCGCCGGCGACGACGTGTTCGCCCTCTCGCCCGCCGCGACGCGCGAGCTCCGCGGCGGCACCGC AGCGGTCGTCGCGCAGAACGCCGGCCAGGCGCTCACGCCCTCCATGCGCGTGGGCCGCCAGCTCCGCGAGGCGCTCGAGA GCCACGGGCTGCCGAGCGAGGACGAGCGGGTCGAGGAGCTGATCCGGCTCGTGCGCCTCCCCGACCCCGCGACCATCGTG CGGCGCTACCCCCACCAGCTGTCCGGCGGGCAGCAGCAGCGCATCGCGATCGCGATGGCCGTCGCCGCGCGCCCCCGGGT GCTCGTGCTCGATGAGCCGACGACCGCGCTCGACGTCGTGACGCAGGCCGCGGTGCTGACCCTGATCCGCGACCTCGCCC GCGAGCTCGGCATGGCGGTGCTGCTCGTCAGCCACGACCTCGGCGTCGTCTCGACGATGGTCGACGAGATCGCGGTGATG CGCGACGGCGTCATCGTGGAGCACCGGCCGACCGCGGAGCTGTTCGCGTCGCCCGAGCACGCGTACACGCGGGAGCTGCT GGCGGCGATCCCGCGTGGTCCGGCGACCGCCGCCCCTCTTCCGGCTCCCGACTCGGAGGCCCCGATGGTCGCCGCCGACG GCCTCGTCGTCCGGTACGCGCGCGGACTGCCGCCCGCGGTGTCCGACGTGTCGTTCACCATCGCGCCGCGCGAGACGCTC GCGGTCGTCGGCGAGTCCGGGAGCGGCAAGACCACGCTCGCGACCGCGCTCGCGGGTCTCGTGCCCACCGAGTCCGGCAC GTTCCGCTTCACCGGCGACGGCGTCACGGGCGACCTGACCCGGGCGGTCGCCGGCCGCTCGCCCGAGCTGCGGCGCGCGG TGCAGCTCGTGTTCCAGAACGCGGATACCTCGCTCAACCCCCGGCGCACGGTCGGCGCCGCGATCGCCCGGCCGCTCAAG CTGTTCACGGGCCGGGCCTCCGCGGAGCGCGTGGGCGAGATCCTCACCGAGGTCGGGCTGTCACCGGACTTCGCGGCCCG GCTGCCGAGCCAGCTCTCGGGCGGCCAGCGGCAGCGCGTCGGGATCGCCCGGGCGCTCGCGGCCGGACCGCAGCTCGTGA TCGCGGACGAGATCACGACCGCGCTCGACGTGCGCGTGCAGGCCGAGATCCTGGATCTGCTCGCCAGGCTGCAGCGCGAC AAGGGCCTCAGCTGCCTCTTCATCAGCCACGACCTCGCCGTCGTGCGCGGCGTCGCGGACCGCGTGGCCGTGATGACCGG CGGGCGGATCGTGGAGATCGGCCCGACCGAGCGCGTGTTCCAGGGGCCGAACCACCCCTACACGCGGCAGCTGCTCGCCG CGACGCTCGAACCCGGCGCGACCGAGCTGCCGACTGTGGAGGACGTGACGGCCACCTGGCGCGACGCCGCGGGTGGAGGG TGGAGGGAGCTCGGCGACGGGCACCGGATCCGGGACTGGGAGGACGCACGATGA Protein sequence : MMPGNVEDTLTGQVRLGTVVRVADLAISYAAGSTDVPVVRGVSFEIRAGRALGLVGESGSGKSTVARTLLAHLRRGSRIV GGSVEVAGDDVFALSPAATRELRGGTAAVVAQNAGQALTPSMRVGRQLREALESHGLPSEDERVEELIRLVRLPDPATIV RRYPHQLSGGQQQRIAIAMAVAARPRVLVLDEPTTALDVVTQAAVLTLIRDLARELGMAVLLVSHDLGVVSTMVDEIAVM RDGVIVEHRPTAELFASPEHAYTRELLAAIPRGPATAAPLPAPDSEAPMVAADGLVVRYARGLPPAVSDVSFTIAPRETL AVVGESGSGKTTLATALAGLVPTESGTFRFTGDGVTGDLTRAVAGRSPELRRAVQLVFQNADTSLNPRRTVGAAIARPLK LFTGRASAERVGEILTEVGLSPDFAARLPSQLSGGQRQRVGIARALAAGPQLVIADEITTALDVRVQAEILDLLARLQRD KGLSCLFISHDLAVVRGVADRVAVMTGGRIVEIGPTERVFQGPNHPYTRQLLAATLEPGATELPTVEDVTATWRDAAGGG WRELGDGHRIRDWEDAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-68 | 42 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-68 | 42 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 2e-68 | 42 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-68 | 42 |
