Gene Information

Name : CMS_0453 (CMS_0453)
Accession : YP_001709228.1
Strain : Clavibacter michiganensis ATCC33113
Genome accession: NC_010407
Putative virulence/resistance : Unknown
Product : insertion element IS1121 transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 488469 - 489431 bp
Length : 963 bp
Strand : -
Note : N/R/C

DNA sequence :
ATGTCCCACGGTAATGCTCGTCTGACGGTTCACGGGAGGGTTCTCCTCGTGCGGCGGGTGGTGGAGGATCGTCGGCCGGT
CGCGCACGTCGCGCGGGAGCTGGGGGTGTCGCGGCAGTGCGCGCATCGATGGGTGAACCGGTTCCGTGCCGAGGGGCTGC
GAGGGCTGACGGATCGGTCATCGCGGCCCCGGTCAGTACCGAGGCGAACGAGCCCGGAGCGGGAACGGGCCGTGCTGGAA
GCGCGGGCCCAGTTGCGGGCGGGTCCTGCGCGGCTGGCGCCGGTGACAGGTGTTCCATCCCGTACGATCTCCCGCATCCT
GCGCCGGCACGGGGCGCCGCCGTTGGCATGGTTGGACCCCGTCACCGGGGCCGTGATCCGGGCATCCCGGTCAACGGCGC
ACCGGTATGAGCACGAGCATCCGGGTGATCTGATCCACGTGGACGTGAAGAAGCTCGGGAGGATCCCGGACGGAGGCGGC
TGGCGGGTCCACGGGCGCAGCGAGCAGGTCCGCGGCCGCGGGATCGGGTTCGATTACGTCCATGCCGCGGTCGATGACCA
CACCCGTCTCGCCTACGCGGAGATCCATCCCGATGAGAAAGGCGCGACCGCGGCCGGGTTCCTGACCCGCGCAGCGGCGT
ACTTCGCCGGGCGCGGGATCACCCGGATCGAGCGGGTCATCACGGACAACGCGTTCGCCTACCGGCACTCGACCGCGTTC
AAGAACGCCGTCCAGGACCTGGGCGCGCGGCAGAAGTTCATCCGCCCGCACTGCCCCTGGCAGAACGGCAAGGTCGAGCG
CTTCAACCGGACCCTCGCGACCGAGTGGGCCTACCGGCAACCCTTCACCAGCAACCAACACCGCGCCGACGCGCTTGACC
CCTTCATCGAGCACTACAACACTGAACGAATCCACTCAAGCCACGGGCTCACGCCCGCGGCCCGAGTGTCACCAACGTCA
TGA

Protein sequence :
MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRWVNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLE
ARAQLRAGPARLAPVTGVPSRTISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG
WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGRGITRIERVITDNAFAYRHSTAF
KNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEWAYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDBH8_0912 YP_005160004.1 transposase-like protein Not tested Not named Protein 1e-29 43
tnp7109-27 YP_001800924.1 transposase for insertion sequence Not tested Not named Protein 5e-27 43