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Name : CMS_0429 (CMS_0429) Accession : YP_001709206.1 Strain : Clavibacter michiganensis ATCC33113 Genome accession: NC_010407 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 464259 - 465539 bp Length : 1281 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : GTGATCGATCCGCAGACCCTCCGCGACCATCCCGACCTCGTCATCGCCTCGCAGGAGCTGCGCGGCGCGTCCGTGGAGGT GGTCGACCAGGCGGTCGCCGCGGACTCCGAGCGCAGGCAGGCGATCACCGAGTTCGAGGGCCTCCGCGCGGAGCAGAACG CGCACGGCAAGCTCGTCGCGAAGGCCGACAAGGCCGACAAGCCGCGCCTCATCGCCGAGGTGCAGGAGCTGAAGGCCCGC GTCACCGCCGCGCAGGAGCGCGCGCAGCAGGCCGAGGCCGCGCTCGACGAGGCGATGCGGCGGATCCCGAACATCGTCAT CGACGGCGTCCCCGCGGGCGGCGAGGACGACTGGGCGCTCCTCCGCGAGGTCGGCGAGAAGGCGGCCTTCGACTTCGAGC CCCGCGACCACCTGGAAATCGGCGAGATCCTCGACGCCATCGACATGGGCCGCGGCGCCAAGGTCTCCGGTGCCCGCTTC CACTTCCTCAAGGGCATCGGCGCCCGGCTCGAGATCGCCCTGATGAACTTCGGCCTGGCCCGCGCGCTCGAGGCGGGCCT CGTGCCGCTCATCACGCCCACGCTCGTGAAGCCCGAGATCATGGCCGGCACGGGCTTCCTCGGCGCCCACGCCGACGAGG TCTACCACCTCGACGACGACGACCTGTACCTCACGGGCACGAGCGAGGTGGCGCTCGCCGGGTACCACGCCGACGAGATC CTCGACCTCGCCGCGGGGCCCATCCGCTACGCCGGCTGGTCCACGTGCTACCGCAAGGAGGCGGGCTCCTACGGCAAGGA CACCCGCGGCATCATCCGCGTGCACCAGTTCCAGAAGCTCGAGATGTTCTCCTACGTCGACCCGGCCGACGCCGAGGCCG AGCACGAGCGCCTCCTCGCCATGCAGGAGCGCATGATGCAGGACCTCGGCCTCGCCTACCGCGTCATCGACACGGCGGCC GGCGACCTCGGGTCGAGCGCCGCCCGCAAGTACGACGTCGAGGCGTGGATCCCCACCCAGGGCGCCTACCGCGAGCTCAC CTCCACCTCGAACTGCACGACGTTCCAGGCCCGCCGTCTCGGCACGCGCTTCCGCGGCGAGGACGGCCGCACATCGCCCG TCGCCACGCTCAACGGCACGCTCGCGACCACGCGCTGGATCGTCGCGATCCTCGAGACCCACCAGCGCGCGGACGGCTCG GTGCGCGTGCCCGAGGCGCTCCGCCCGTACCTCGGTGGCCTCGAGGTGCTCGAGCCGGCCACGGCGAAGGCGGCCCGATG A Protein sequence : MIDPQTLRDHPDLVIASQELRGASVEVVDQAVAADSERRQAITEFEGLRAEQNAHGKLVAKADKADKPRLIAEVQELKAR VTAAQERAQQAEAALDEAMRRIPNIVIDGVPAGGEDDWALLREVGEKAAFDFEPRDHLEIGEILDAIDMGRGAKVSGARF HFLKGIGARLEIALMNFGLARALEAGLVPLITPTLVKPEIMAGTGFLGAHADEVYHLDDDDLYLTGTSEVALAGYHADEI LDLAAGPIRYAGWSTCYRKEAGSYGKDTRGIIRVHQFQKLEMFSYVDPADAEAEHERLLAMQERMMQDLGLAYRVIDTAA GDLGSSAARKYDVEAWIPTQGAYRELTSTSNCTTFQARRLGTRFRGEDGRTSPVATLNGTLATTRWIVAILETHQRADGS VRVPEALRPYLGGLEVLEPATAKAAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 5e-68 | 43 |
