Gene Information

Name : CMS_0421 (CMS_0421)
Accession : YP_001709198.1
Strain : Clavibacter michiganensis ATCC33113
Genome accession: NC_010407
Putative virulence/resistance : Unknown
Product : insertion element ISCmi2 transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 455867 - 456829 bp
Length : 963 bp
Strand : -
Note : Nu/R

DNA sequence :
GTGACTCACGCTAACGCCCCGTTCACTCCTGCGGGCAGGGTTCGGCTTGCCCGGTTGATCATCGAGGACGGGTGGCCGGT
CCGGCGTGCGGCGGAGAGGTTCCAGTGCTCGCCCGCGACCGCGTCGAGATGGGCTCGCCGGTATCGGGCCGGGTTGCCGA
TGACGGACCGCTCATCCCGCCCGCACCGGCAACCGACCCGCACGAGTCAGCGTCGGGAGCGGCGGATCATCGCGCTGAGA
TTCACTCGCCGGTGGGGCCCGCACCGCATCAGCTATCACCTCCGCGTTCCGCGTTCGACGGTCGAGCGGGTGCTGAACCG
GTATCGGATGCCGTTGCTCGAGCACGTCGATCTGAGCACCGGGCTCCCTGCCCGGCGGTCTCCTGCCCGACGCTACGAGC
ACTCCTCGCCGGGAGATCTGGTCCACGTCGACATCAAGAAGCTCGGCCGCATCCCGGACGGCGGCGGGCACCGAGTCCTC
GGCAGAGCGGCCGGCCGGAGGAACACTCCCCGGACCGGGCGGGGATACGCGTTCCTGCACCACGCCGTGGATGACCACTC
CCGACTCGCGTACTCCGAGATCCTCACCGACGAGCGCAAGGAGACCGCCGCCGCGTTCTGGGCCCGCGCGAACGCGTTCT
TCACCACCGCGGGCATCACCGTGATCCGTGTCCTGACGGACAACGGCTCCTGCTACCGCTCCCACGCCTTCACCGAGGCG
CTCGGCACCATCGCCCACACACGCACCCGCCCCTACCGGCCCCAGACCAACGGGAAGGTCGAGCGCTTCAACCGCACCCT
CGCCACCGAGTGGGCCTACGCCCATCCCTATCGCACCGACGAGGCCCGCGCCGCGACCTACCCTGCCTGGCTGCATCACT
ACAACCACCACCGCCCCCACACCGGCATCGGCGGACTCACGCCCGCCGAACGCGTTCACAACCTCACTGGGAACTACACC
TAG

Protein sequence :
MTHANAPFTPAGRVRLARLIIEDGWPVRRAAERFQCSPATASRWARRYRAGLPMTDRSSRPHRQPTRTSQRRERRIIALR
FTRRWGPHRISYHLRVPRSTVERVLNRYRMPLLEHVDLSTGLPARRSPARRYEHSSPGDLVHVDIKKLGRIPDGGGHRVL
GRAAGRRNTPRTGRGYAFLHHAVDDHSRLAYSEILTDERKETAAAFWARANAFFTTAGITVIRVLTDNGSCYRSHAFTEA
LGTIAHTRTRPYRPQTNGKVERFNRTLATEWAYAHPYRTDEARAATYPAWLHHYNHHRPHTGIGGLTPAERVHNLTGNYT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp7109-27 YP_001800924.1 transposase for insertion sequence Not tested Not named Protein 2e-49 52
CDBH8_0912 YP_005160004.1 transposase-like protein Not tested Not named Protein 4e-53 51