Gene Information

Name : CMS_2999 (CMS_2999)
Accession : YP_001711625.1
Strain : Clavibacter michiganensis ATCC33113
Genome accession: NC_010407
Putative virulence/resistance : Unknown
Product : insertion element IS1121 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2826
EC number : -
Position : 3153928 - 3154890 bp
Length : 963 bp
Strand : +
Note : Nu/R

DNA sequence :
ATGTCCCACGCTAATGCCCGGTTGACTGTTCATGGTCGGCTTCTCCTCGTGCGTCGGGTAGTCGAGGATCGTCGTCCGGT
GTCGCATGTGGCTCGCGAGCTCGGGGTGTCGCGTCAGTGCGCGCATCGGTGGGTGGCCCGGTTCCGTCAGGAGGGTGTCG
CGGGGCTCGCGGATCGGTCCTCGAGACCACGGTCGATGCCGGCGAGGACGAGTCCGGAACAGGAAGGCGCCGTGCTGGCT
GCGCGCGCGGAACTTCGGTTCGGGCCCGCCCGGCTGGCTCCGGTGACGAGCGTTCCGGCCCGCACGATCTCCCGCATCCT
GCGCCGGCACGGGGCGCCGCCGTTGGCATGGTTGGACCCCGTCACCGGGGCCGTGATCCGGGCATCCCGGTCAACGGCGC
ACCGGTATGAGCACGAGCATCCGGGTGATCTGATCCACGTGGACGTGAAGAAGCTCGGGAGGATCCCGGACGGAGGCGGC
TGGCGGGTCCACGGGCGCAGCGAGCAGGTCCGCGGCCGCGGGATCGGGTTCGATTACGTCCATGCCGCGGTCGATGACCA
CACCCGTCTCGCCTACGCGGAGATCCATCCCGATGAGAAAGGCGCGACCGCGGCCGGGTTCCTGGCCCGCGCAGCGGCGT
ACTTCGCCGGGCGCGGGATCACCCGGATCGAGCGGGTCATCACGGACAACGCGTTCGCCTACCGGCACTCGACCGCGTTC
AAGAACGCCGTCCAGGACCTGGGCGCGCGGCAGAAGTTCATCCGCCCGCACTGCCCCTGGCAGAACGGCAAGGTCGAGCG
CTTCAACCGGACCCTCGCGACCGAGTGGGCCTACCGGCAACCCTTCACCAGCAACCAACACCGCGCCGACGCGCTTGACC
CCTTCATCGAGCACTACAACACTGAACGAATCCACTCAAGCCACGGGCTCACGCCCGCGGCCCGAGTGTCACCAACGTCA
TGA

Protein sequence :
MSHANARLTVHGRLLLVRRVVEDRRPVSHVARELGVSRQCAHRWVARFRQEGVAGLADRSSRPRSMPARTSPEQEGAVLA
ARAELRFGPARLAPVTSVPARTISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG
WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLARAAAYFAGRGITRIERVITDNAFAYRHSTAF
KNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEWAYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDBH8_0912 YP_005160004.1 transposase-like protein Not tested Not named Protein 9e-34 43
tnp7109-27 YP_001800924.1 transposase for insertion sequence Not tested Not named Protein 4e-29 42