Gene Information

Name : CMS_2885 (CMS_2885)
Accession : YP_001711518.1
Strain : Clavibacter michiganensis ATCC33113
Genome accession: NC_010407
Putative virulence/resistance : Unknown
Product : insertion element IS1121 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2826
EC number : -
Position : 3042429 - 3043391 bp
Length : 963 bp
Strand : +
Note : N/R

DNA sequence :
ATGTCCCACGCTAATGCCCGGTTGACTGTTCATGGTCGGCTTCTCCTCGTGCGTCGGGTAGTCGAGGATCGTCGTCCGGT
GTCGCATGTGGCTCGCGAGCTCGGGGTGTCGCGTCAGTGCGCGCATCGGTGGGTGGCCCGGTTCCGTCAGGAGGGTGTCG
CGGGGCTCGCGGATCGGTCCTCGAGACCACGGTCGATGCCGGCGAGGACGAGTCCGGAACAGGAAGGCGCCGTGCTGGCT
GCGCGCGCGGAACTTCGGTTCGGGCCCGCCCGGCTGGCTCCGGTGACGAGCGTTCCGGCCCGCACGATCTCCCGGATCCT
GCGCCGGCACGGGGCGCCGCCGTTGGCATGGTTGGACCCTGTAACCGGGGCGGTGATCCGGGCATCCCGGTCAACGGCGC
ACCGGTATGAGCACGAGCATCCGGGTGATCTGATCCACGTGGACGTGAAGAAGCTCGGGAGGATCCCGGACGGAGGCGGC
TGGCGGGTCCACGGGCGCAGCGAGCAGGTCCGCGGCCGCGGGATCGGGTTCGATTACGTCCATGCCGCGGTCGATGACCA
CACCCGTCTCGCCTACGCGGAGATCCATCCCGATGAGAAAGGCGCGACCGCGGCCGGGTTCCTGACCCGCGCAGCGGCGT
ACTTCGCCGGGCGCGGGATCACCCGGATCGAGCGGGTCATCACGGACAACGCGTTCGCCTACCGGCACTCGACCGCGTTC
AAGAACGCCGTCCAGGACCTGGGCGCGCGGCAGAAGTTCATCCGCCCGCACTGCCCCTGGCAGAACGGCAAGGTCGAGCG
CTTCAACCGGACCCTCGCGACCGAGTGGGCCTACCGGCAACCCTTCACCAGCAACCAACACCGGGCCGACGCGCTTGACC
CCTTCATCGAGCACTACAACACTGAACGGATCCACTCGAGCCACGGGCTGACGCCCGCGGCCCGAGTGTCACCAACGTCA
TGA

Protein sequence :
MSHANARLTVHGRLLLVRRVVEDRRPVSHVARELGVSRQCAHRWVARFRQEGVAGLADRSSRPRSMPARTSPEQEGAVLA
ARAELRFGPARLAPVTSVPARTISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG
WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGRGITRIERVITDNAFAYRHSTAF
KNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEWAYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDBH8_0912 YP_005160004.1 transposase-like protein Not tested Not named Protein 4e-35 43
tnp7109-27 YP_001800924.1 transposase for insertion sequence Not tested Not named Protein 2e-30 42