Gene Information

Name : hemC (CMS_2841)
Accession : YP_001711474.1
Strain : Clavibacter michiganensis ATCC33113
Genome accession: NC_010407
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 2994599 - 2995585 bp
Length : 987 bp
Strand : -
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence : 
GTGACGGACGGTCCCACGACGTCGGCTCCGACGACGACGCTCCGCATCGGGACCCGGGGGAGCGCGCTCGCCCTGGCCCA
GACGCGGGCGATCGCCGCGGAGATCACCGGCGCGTCGGGACTCGAGGTCGAGCTCGTGCCCGTGACCACGCACGGCGACA
CGTCGCGCGAGTCCCTGTCGAGCCTCGGCGGCACGGGCGTGTTCGCCAGCGCGCTCCGGGAGTCGCTGCTGCGCGGCGAG
TGCGACCTCGTGGTGCACTCGCTCAAGGACCTGCCGACGGCGCCGTACGCGGGCCTCACGGTCGCGTCGGTGCCGGTGCG
CGAGGACCCGCGCGACGTGCTGTGCGCGCGCGACGGCCTCACACTCGCGACCCTGCCGCGCGGCGCCCGCGTCGGCACCG
GATCACCGCGCCGCCGCGCGCAGATCCTCGCCGAGCGCCCGGACCTCGACGTGGTCGACATCCGCGGCAACATCGACACC
CGCCTCTCCCGCGTGACCGCGGGCGACCTCGACGCCGTGGTGCTCGCCGCCGCCGGCCTCGAGCGCATCGACCGCATCGG
CGCCGCCACCGAGCACCTCGAGCTGGACCGCTGGCCCACCGCACCCGGGCAGGGCGCGCTGGCCCTCGAGATCCGCACGG
AGGACGCCGAGACGCACTCGGTCGTCGGCCGTGCCGTCGAGGCCGTCGACGACCCCTTCACGCATGCCGCCGTGCTCGCG
GAGCGCGGCGTGCTGGCCGCCCTCGAGGCCGGATGCGCGGCGCCCATCGGCGCCTGGGCCACCGTCACGAGCGCCCGCCT
CGCCCTCACCGCCGTGGTTTACCGGCCCGACGGCACGCAGCGCATGGCCGCGAGCCACGAGCTCGACACCGCGGGGCTCG
ATCTCGCGCAGCTGGGCGCATCCGCCTCCGCGCTCTCGGGGCCCGTGTCCCGCGAGCTCCTCGACGCCGGAGCGGCCGAT
CTCGCGCCGCTGGGAGGGACCCGATGA

Protein sequence : 
MTDGPTTSAPTTTLRIGTRGSALALAQTRAIAAEITGASGLEVELVPVTTHGDTSRESLSSLGGTGVFASALRESLLRGE
CDLVVHSLKDLPTAPYAGLTVASVPVREDPRDVLCARDGLTLATLPRGARVGTGSPRRRAQILAERPDLDVVDIRGNIDT
RLSRVTAGDLDAVVLAAAGLERIDRIGAATEHLELDRWPTAPGQGALALEIRTEDAETHSVVGRAVEAVDDPFTHAAVLA
ERGVLAALEAGCAAPIGAWATVTSARLALTAVVYRPDGTQRMAASHELDTAGLDLAQLGASASALSGPVSRELLDAGAAD
LAPLGGTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 7e-28 42
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 7e-28 42