Gene Information

Name : CMS_2484 (CMS_2484)
Accession : YP_001711141.1
Strain : Clavibacter michiganensis ATCC33113
Genome accession: NC_010407
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2634697 - 2635377 bp
Length : 681 bp
Strand : -
Note : -

DNA sequence :
ATGCACATGACCGGATCCACGCCCGTCGACGGACCCGCGGTGTGCGAGCTCACCGACGTCACGCGGGCATTCCGCGGGCG
GGAGGTCGTGCGCGGGCTGTCCCTGCGGGTCGAGGCGGGCGAGATGGTGGCGCTGACCGGTCGGAGCGGATGCGGGAAAT
CCACGGTTCTCAACATGATCGGGCTCCTCGACCGCCCGACCTCGGGCCAGCTGGCGCTCTTCGGCGCGCCGGCACCGCGT
CCCGGGACCCGGGGTGCGCGACGTCTGCTCGCCGAGCGGATCGGGTACCTGTTCCAGAGCTTCGCGCTCCTCGACGAGGA
GACGGCGGACGGCAACCTCCGCGTCGCGCAGGCGTGGACGGGAGGCACCCGGCACTCCCGCGCCGAGCAGCGTGCGGATG
CGCTGGCGACCGTGGGTCTCGCGGACCACGCACGTGATCGCGTCTACGAGCTGTCGGGTGGCGAGCAGCAGCGCCTGGCC
GTGGCGCGGCTGGCGCTGCGGCCCCGGGCCCTCGTGCTGGCTGACGAGCCGACCGGATCCCTGGACCCCGAGAACCGCGC
CAGCGTCCTCGACATGCTCGAGGGGATGCGCCGCCGGGGGACGGCGGTCGTGATCGTGACGCACGACCCGGAGGTCGCCG
CGGCGTGCACTCGGGTGGTGCCGTTGGAGCGCGCCCGCTAG

Protein sequence :
MHMTGSTPVDGPAVCELTDVTRAFRGREVVRGLSLRVEAGEMVALTGRSGCGKSTVLNMIGLLDRPTSGQLALFGAPAPR
PGTRGARRLLAERIGYLFQSFALLDEETADGNLRVAQAWTGGTRHSRAEQRADALATVGLADHARDRVYELSGGEQQRLA
VARLALRPRALVLADEPTGSLDPENRASVLDMLEGMRRRGTAVVIVTHDPEVAAACTRVVPLERAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-27 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CMS_2484 YP_001711141.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 2e-34 46