Gene Information

Name : CMS_2328 (CMS_2328)
Accession : YP_001710995.1
Strain : Clavibacter michiganensis ATCC33113
Genome accession: NC_010407
Putative virulence/resistance : Unknown
Product : insertion element ISCmi2 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3415
EC number : -
Position : 2464946 - 2465908 bp
Length : 963 bp
Strand : +
Note : N

DNA sequence :
GTGACTCACGCTAATGCCCCGTTCACTCCCGTGGGCAGGGTTCGGCTTGCCCGGTTGATCATCGAGGACGGGTGGCCGGT
CCGGCGTGCGGCGGAGAGGTTCCAGTGCTCGCCCGCGACCGCGTCGAGATGGGCTCGCCGGTATCGGGCCGGGTTGCCGA
TGACGGACCGCTCATCCCGCCCGCACCGGCAACCGACCCGCACGAGTCAGCGTCGGGAGCGGCGGATCATCGCGCTGAGA
TTCACTCGCCGGTGGGGCCCGCACCGCATCAGCTACCACCTGCGTATCCCCCGTTCCACGGTCGAGCGGGTCCTCCGTCG
CTACCGGATGCCGTTGCTCACGCACCTGGATTCCGCGACGGGACTCCCCGTCCGACGCTCGCCCGCGCGACGTTACGAGC
ACTCCTCGCCGGGAGATCTGGTCCACGTCGACATCAAGAAGCTCGGCCGCATCCCGGACGGCGGCGGGCACCGAGTCCTC
GGCCGACAGGCCGGCCGGAAGAACAACCCCCGGACCGGGCGGGGATACGCGTTCCTGCACCACGCCGTGGATGACCACTC
CCGACTCGCGTACTCCGAGATCCTCACCGACGAGCGCAAGGAGACCGCCGCCGCGTTCTGGGCCCGCGCGAACGCGTTCT
TCACCACCGCGGGCATCACCGTGATCCGTGTCCTGACGGACAACGGCTCCTGCTACCGCTCCCACGCCTTCACCGAGGCG
CTCGGCACCATCGCCCACACACGCACCCGCCCCTACCGGCCCCAGACCAACGGGAAGGTCGAGCGCTTCAACCGCACCCT
CGCCACCGAGTGGGCCTACGCCCACCCCTACCTCACCGACGAGGCCCGCGCCGCGACCTACCCTGCCTGGCTGCATCACT
ACAACCACCACCGCCCCCACACCGGCATCGGCGGACTCACGCCCGCCGAACGCGTTCACAACCTCACTGGGAACTACAAC
TAG

Protein sequence :
MTHANAPFTPVGRVRLARLIIEDGWPVRRAAERFQCSPATASRWARRYRAGLPMTDRSSRPHRQPTRTSQRRERRIIALR
FTRRWGPHRISYHLRIPRSTVERVLRRYRMPLLTHLDSATGLPVRRSPARRYEHSSPGDLVHVDIKKLGRIPDGGGHRVL
GRQAGRKNNPRTGRGYAFLHHAVDDHSRLAYSEILTDERKETAAAFWARANAFFTTAGITVIRVLTDNGSCYRSHAFTEA
LGTIAHTRTRPYRPQTNGKVERFNRTLATEWAYAHPYLTDEARAATYPAWLHHYNHHRPHTGIGGLTPAERVHNLTGNYN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp7109-27 YP_001800924.1 transposase for insertion sequence Not tested Not named Protein 5e-50 51
CDBH8_0912 YP_005160004.1 transposase-like protein Not tested Not named Protein 7e-54 51