Gene Information

Name : CMS_0219 (CMS_0219)
Accession : YP_001709005.1
Strain : Clavibacter michiganensis ATCC33113
Genome accession: NC_010407
Putative virulence/resistance : Unknown
Product : insertion element IS1121 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2826
EC number : -
Position : 254527 - 255489 bp
Length : 963 bp
Strand : -
Note : Nu

DNA sequence :
ATGTCCCACGGTAATGCTCGTCTGACGGTTCACGGGAGGGTTCTCCTCGTGCGGCGGGTGGTGGAGGATCGTCGGCCGGT
CGCGCACGTCGCGCGGGAGCTGGGGGTGTCGCGGCAGTGCGCGCATCGATGGGTGAACCGGTTCCGTGCCGAGGGGCTGC
GAGGGCTGACGGATCGGTCATCGCGGCCCCGGTCAGTACCGAGGCGAACGAGCCCGGAGCGGGAACGGGCCGTGCTGGAA
GCGCGGGCCCAGTTGCGGGCGGGTCCTGCGCGGCTGGCGCCGGTGACAGGTGTTCCATCCCGTACGATCTCCCGCATCCT
GCGCCGGCACGGGGCGCCGCCGTTGGCATGGTTGGACCCCGTCACCGGGGCCGTGATCCGGGCATCCCGGTCAACGGCGC
ACCGGTATGAGCACGAGCATCCGGGTGATCTGATCCACGTGGACGTGAAGAAGCTCGGGAGGATCCCGGACGGAGGCGGC
TGGCGGGTCCACGGGCGCAGCGAGCAGGTCCGCGGCCGCGGGATCGGGTTCGATTACGTCCATGCCGCGGTCGATGACCA
CACCCGTCTCGCCTACGCGGAGATCCATCCCGATGAGAAAGGCGCGACCGCGGCCGGGTTCCTGGCCCGCGCAGCGGCGT
ACTTCGCCGGGCATGGGATCACCCGGATCGAGCGGGTCATCACGGACAACGCGTTCGCCTACCGGCACTCGACCGCGTTC
AAGAACGCCGTCCAGGACCTGGGCGCGCGGCAGAAGTTCATCCGCCCGCACTGCCCCTGGCAGAACGGCAAGGTCGAGCG
CTTCAACCGGACCCTCGCGACCGAGTGGGCCTACCGGCAACCCTTCACCAGCAACCAACACCGCGCCGACGCGCTTGACC
CCTTCATCGAGCACTACAACACTGAACGAATCCACTCAAGCCACGGGCTCACGCCCGCGGCCCGAGTGTCACCAACGTCA
TGA

Protein sequence :
MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRWVNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLE
ARAQLRAGPARLAPVTGVPSRTISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG
WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLARAAAYFAGHGITRIERVITDNAFAYRHSTAF
KNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEWAYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDBH8_0912 YP_005160004.1 transposase-like protein Not tested Not named Protein 2e-28 43
tnp7109-27 YP_001800924.1 transposase for insertion sequence Not tested Not named Protein 1e-25 43