Gene Information

Name : rph (CMS_2100)
Accession : YP_001710787.1
Strain : Clavibacter michiganensis ATCC33113
Genome accession: NC_010407
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 2227495 - 2228232 bp
Length : 738 bp
Strand : -
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGACCGACGACACCCCCCGCCACGACGGCCGTACCGCCGACCAGCTGCGCGAGATCACGATCGAGCGGGACTGGAGCGA
GCAGGCCGAGGGATCCGCCCTCATCTCCTTCGGCCGCACCCGCGTCCTCTGCACCGCGTCCTTCACGAACCGCGTGCCGC
GCTGGAAGGCGGGCAGCGGCCAGGGCTGGGTCACCGCCGAGTACGCGATGCTGCCGCGCGCCACGAACGAGCGCATGGAC
CGCGAGGCCGTCAAGGGCAAGGTCGGCGGACGCACGCACGAGATCTCCCGTCTCATCGGCCGCAGCCTCCGCGCCGTCGT
CGACATGAAGGCGCTCGGCGAGAACACCGTCGTCATCGACTGCGACGTGCTGCAGGCCGACGGCGGCACGCGCACCGCGG
CGATCACGGGCGCGTACGTCGCCCTCGCCGACGCGCTCGAGTGGGGCCGCGAGAGGAAGTTCATCGCGCAGCGCGCCACG
CCGCTCAAGGACAGCGTCGCCGCGGTCTCCGTCGGGATCGTCGACGGGAAGCCGCTGCTCGACCTCGCCTACGTCGAGGA
CGTGCGCGCGGAGACCGACATGAACGTCGTGATGACGGGCAGCGGGTCGTTCGTGGAGGTCCAGGGCACCGCCGAGGGCG
CGCCCTTCGACCGCGCGGAGCTGGACGCCCTGCTCGACCTGGCGCTCGGCGGCGGCACCACGCTCACCGCGCTGCAGGCG
CAGGCGCTCGGTCGCTGA

Protein sequence :
MTDDTPRHDGRTADQLREITIERDWSEQAEGSALISFGRTRVLCTASFTNRVPRWKAGSGQGWVTAEYAMLPRATNERMD
REAVKGKVGGRTHEISRLIGRSLRAVVDMKALGENTVVIDCDVLQADGGTRTAAITGAYVALADALEWGRERKFIAQRAT
PLKDSVAAVSVGIVDGKPLLDLAYVEDVRAETDMNVVMTGSGSFVEVQGTAEGAPFDRAELDALLDLALGGGTTLTALQA
QALGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 2e-63 66