Gene Information

Name : CMS_0196 (CMS_0196)
Accession : YP_001708982.1
Strain : Clavibacter michiganensis ATCC33113
Genome accession: NC_010407
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1132
EC number : -
Position : 235163 - 237094 bp
Length : 1932 bp
Strand : -
Note : -

DNA sequence :
ATGAGCACCGCCCGCCCCGAGACCGCCGCCGCGCCGCGCGCCCGCTCCCGCAACCCGTTCGCCCGTCGCGACTCCGCCGA
CGACGGGCCCCGCGCGCGCTTCTCGGAGCTCCTCCCCTACATCCTCGAGCAGCGCGGGCTGATGGCCTTCGTCGTCGTGC
TGAGCGTCCTCGGCGCCGCCGCGAGCCTCGGCCAGCCGCTCCTCGTGCAGCGCGTCGTCGGCGTCGTGCAGGAGGGCGGC
CAGCTCGGCGTCCTCGTGTGGGCGCTCGTCGGCCTGGTCGTCGTGTCCGGCGTGCTGTCCGGCTACCAGCACTACCTGCT
GCAGCGGATGGGCGAGGGCATCGTGCTCTCGTCGCGCCGCACGCTCGTGCGCCGGATCCTCCGCCTCCCCATCTCCGAGT
TCGACACCCGCCGCACGGGCGACCTCGTCTCGCGCGTCGGCTCCGACACCACGCTCCTCCGCGCCGTGCTCACGCAGGGC
CTCGTCGAGGCGATCGGCGGCGCGGTCACGTTCCTCGGCGCCATCATCGCGATGCTCATCATCGACCCCGTGCTCCTCAG
CCTCACCGTGCTGGTCGTCGCCGTCTCGGTGGTCGCCGTCGTGGGCCTGTCCGGCCGGATCCGCGTGGCCAGCCAGCGCG
CGCAGCGCAAGGTCGGCGACCTGGCCGCGAGCGTCGAGCGGGCCATCGGCGCGATCCGCACCGTCCGCGCCAGCAACCCG
ACCGACCGCGAGATCCGCGCCATCGAGGCCGACGCCGAGGGCGCCTGGGAGATGGGGATCAAGGTCGCGAAGGCGTCCGC
CGTCGTCGTGCCCATCGCGGGCATCGCGCTGCAGGCGTCGTTCCTCGTGGTGGTCGGCGTCGGCGGCTACCGCGTCGCGG
CCGGTGCCATCACGGTCGGCGACCTCGTGGCATTCATCCTGTTCCTCTTCCTGATGATCATGCCGCTCGGCCAGGCCTTC
GGTGCCGTGACCGCCGTCAACCAGGCGCTCGGCGCGCTCGGCCGCATCCAGGAGATCGTGAAGCTACCGGTCGAGACCGA
CGGCGACGCCGACCTCGCCGCACGACTCCGCGACGACGCGCCCGCGGGCGACGACCGCACGGACGCACCCGCCGTGGAGC
TCGTGGACGTGCGGTTCGCGTACCCGGTGGCGGCGGATGCGGACGCCACCGCAGACGGTGCCGCGACGACCGAGGCACCC
GCTTCTCCGGCCGACTCCGCGGACGCCTCCCCCGGCGCCGACCGCACGGGCGGCGGCGTCCTGCAGGGCATCAGCTTCCG
CGCCGAGCGGGGCACCCGGATCGCGCTCGTCGGCCCCTCGGGCGCGGGCAAGAGCACGATCCTCGCCCTGATCGAGCGCT
TCTACGACCCGACCTCCGGCGTCGTCCGGGTCGGCGGCCGCGACATCCGCACGCTCGACCGCGAGGACCTCCGCCGCCAG
ATCGGCTACGTCGAGCAGGACGCCCCCGTCCTCGCCGGCACGCTCCGCGAGAACCTGACCCTCACCGCGTTCGACGCGAC
CGACGAGGACTGCGTCCAGGTGCTGCACGCGGTGAACCTCACCGAGGTGCTCGCGCGCAACGAGCTCGGCCTCGACGCGC
CCGTCGGCGAAGACGGCATCATGCTGTCCGGCGGCGAGCGCCAGCGCCTCGCGATCGCGCGCACGCTGCTCTCGGCTCCC
CCGATCCTGCTGCTCGACGAGTCCACGTCCAGCCTCGACGGCCTCAACGAGCAGCTGCTCCGCAAGGCGATCGACGCGGT
CGCCGAGCACCGCACCCTCATCGTGATCGCGCACCGGCTCTCGACCGTCGTCGACAGCGACCTCATCGTGGTCGTCGAGA
AGGGCCGCGTCGTCGGCACGGGCACGCACGCCGAGCTCGTCGTCTCGACGCCGCTCTACCGCGACCTCGCGAAGCACCAG
CTGCTCGTGTAG

Protein sequence :
MSTARPETAAAPRARSRNPFARRDSADDGPRARFSELLPYILEQRGLMAFVVVLSVLGAAASLGQPLLVQRVVGVVQEGG
QLGVLVWALVGLVVVSGVLSGYQHYLLQRMGEGIVLSSRRTLVRRILRLPISEFDTRRTGDLVSRVGSDTTLLRAVLTQG
LVEAIGGAVTFLGAIIAMLIIDPVLLSLTVLVVAVSVVAVVGLSGRIRVASQRAQRKVGDLAASVERAIGAIRTVRASNP
TDREIRAIEADAEGAWEMGIKVAKASAVVVPIAGIALQASFLVVVGVGGYRVAAGAITVGDLVAFILFLFLMIMPLGQAF
GAVTAVNQALGALGRIQEIVKLPVETDGDADLAARLRDDAPAGDDRTDAPAVELVDVRFAYPVAADADATADGAATTEAP
ASPADSADASPGADRTGGGVLQGISFRAERGTRIALVGPSGAGKSTILALIERFYDPTSGVVRVGGRDIRTLDREDLRRQ
IGYVEQDAPVLAGTLRENLTLTAFDATDEDCVQVLHAVNLTEVLARNELGLDAPVGEDGIMLSGGERQRLAIARTLLSAP
PILLLDESTSSLDGLNEQLLRKAIDAVAEHRTLIVIAHRLSTVVDSDLIVVVEKGRVVGTGTHAELVVSTPLYRDLAKHQ
LLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0911 YP_001198277.1 ABC transporter Not tested 89K Protein 5e-81 41