Gene Information

Name : pyk (CMS_2004)
Accession : YP_001710697.1
Strain : Clavibacter michiganensis ATCC33113
Genome accession: NC_010407
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 2122837 - 2124294 bp
Length : 1458 bp
Strand : -
Note : -

DNA sequence :
ATGACCAGACGAGCGAAGATCGTCGCGACCCTCGGGCCCGCGACCAGCTCCTATGAGAGCATCCGCGCCATCATCGACGC
CGGCGTGGACGTGGCCCGGATGAACCTCAGCCACGGCACCTACGACGTCCACGAGGGCATCTACTCCACCATCCGGAAGG
CCGCAGACGACGCGGGCCGCGCGGTCGCGGTCCTGGTCGACCTGCAGGGCCCGAAGATCCGCCTCGGCAAGTTCTCCGAC
GGCCCGCACGACCTGGCCTTCGGCGACACCTTCGTCATCACCGTCGAGGACATCCTCGGCACGAAGGACATCTGCTCCAC
CACCTACAAGGGCCTCCCCGGCGACGTGAAGCCGGGCGACCCGCTGCTCATCGACGACGGCAAGGTCACGCTCCGCGTGG
TCTCCACCGACGGCACCCGCGTCACGACCACGGTCGAGGTGGCCGGCACGGTCAGCAACAACAAGGGCATCAACCTCCCG
GGCGTCGCGGTCAACGTGCCCGCACTGTCCGGCAAGGACGAGGCGGATCTCCGCTGGGGCCTCCGTCTCGGCGCCGACCT
CATCGCGCTGAGCTTCGTCCGCGACGCGTCGGACATCGTCCGCGTGCACGAGATCATGGACGAGGAGGGCCGTCGCGTCC
CCGTCGTCGCCAAGGTCGAGAAGCCGCAGGCCGTGGACGCGCTCGAGGAGATCGTGGACGCGTTCGACGCGATCATGGTC
GCCCGCGGCGACCTGGGCGTCGAGCTGCCGCTCGAGGCAGTGCCGATCGTGCAGAAGCGCGCGGTCGAGCTCGCCCGCCG
CAAGGCCAAGCCCGTCATCGTCGCGACGCAGATGCTCGAGTCCATGATCACGAGCCCGCGGCCCACGCGCGCCGAGGCGT
CCGACTGCGCCAACGCGGTGCTCGACGGCGCCGACGCCCTCATGCTGAGCGGCGAGACGAGCGTGGGCGAGTTCCCCGTC
GTCACGGTCAAGACCATGGCGCGCATCATCGAGTCCACCGAGGAGCACGGGCTGGAGCGCATCCCGAAGCTCGGCACGCG
CCCGTTCACCCAGGGGGGCGCCATCACGCTGGCCGCCGCCGAGGTCGCCGAGTTCGTCGATGCGAAGGCGCTCTGCGTCT
TCACCGAGTCGGGCGACTCGGTGCGCCGGATGACGCGCCTGCGCAACGGCATCCCGATCCTCGCCTTCACGCCGAACGAG
GGCATCCGCCGTCGCCTCGCGCTCTCGTGGGGCGTGCAGACGTACCTCGTGGAGCCGGTCACGCACACCGACCAGATGTT
CCATCAGGTGGATGACGTGCTCCTCGCGGAGGGCCTCGCGGAGGGCCTCGCCGAGGTCGGCCAGAAGGTCGTCGTCATCG
CCGGATCCCCTCCCGGGATCGCGGGCTCCACCAACGAGCTGCGCGTCCACGTCGTCGGCGACGCCGTGAACGAGGCGGCT
CCCGCGTACGAGAAGTAG

Protein sequence :
MTRRAKIVATLGPATSSYESIRAIIDAGVDVARMNLSHGTYDVHEGIYSTIRKAADDAGRAVAVLVDLQGPKIRLGKFSD
GPHDLAFGDTFVITVEDILGTKDICSTTYKGLPGDVKPGDPLLIDDGKVTLRVVSTDGTRVTTTVEVAGTVSNNKGINLP
GVAVNVPALSGKDEADLRWGLRLGADLIALSFVRDASDIVRVHEIMDEEGRRVPVVAKVEKPQAVDALEEIVDAFDAIMV
ARGDLGVELPLEAVPIVQKRAVELARRKAKPVIVATQMLESMITSPRPTRAEASDCANAVLDGADALMLSGETSVGEFPV
VTVKTMARIIESTEEHGLERIPKLGTRPFTQGGAITLAAAEVAEFVDAKALCVFTESGDSVRRMTRLRNGIPILAFTPNE
GIRRRLALSWGVQTYLVEPVTHTDQMFHQVDDVLLAEGLAEGLAEVGQKVVVIAGSPPGIAGSTNELRVHVVGDAVNEAA
PAYEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 5e-68 41
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 2e-68 41
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 2e-68 41
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 4e-60 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pyk YP_001710697.1 pyruvate kinase VFG0479 Protein 9e-69 41